Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq337 596 2e-165 seq14 596 2e-165 seq4 419 3e-112 seq7 282 5e-71 seq1 154 2e-32 seq12 89.7 6e-13 >seq337 Length=135516 Score = 596 bits (660), Expect = 2e-165 Identities = 725/988 (73%), Gaps = 0/988 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 1627 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 1568 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 |||||| || || | ||| | |||||| | || || ||||||||||||||||||| Sbjct 1567 GATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 1508 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 || || || || || || || ||||| || || |||||||| | | ||||| ||||| Sbjct 1507 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 1448 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 || || |||||||| || |||| |||| || || || | || || || || || Sbjct 1447 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 1388 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGT 166067 |||||||| ||||| |||| |||||| | || || || ||||||| | || |||| Sbjct 1387 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1328 Query 166068 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 166127 | |||||| | |||| | | || |||||||||||||||||||| || ||| Sbjct 1327 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1268 Query 166128 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGC 166187 ||| |||||||| || ||||| |||||| || ||||| || || || ||||| | ||| Sbjct 1267 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1208 Query 166188 AGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 166247 || ||| | | |||||| | |||||||| ||||||||||||| ||||| | ||||| Sbjct 1207 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 1148 Query 166248 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 166307 || || || ||||||| ||| | || ||||| || |||||||| || || |||||||| Sbjct 1147 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 1088 Query 166308 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 166367 || || ||| | || || ||||| ||||| || || | || ||||||||||| || Sbjct 1087 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 1028 Query 166368 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 166427 ||||| || ||| | | | || || || ||||||| || || || | || Sbjct 1027 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 968 Query 166428 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 166487 |||||| || || ||||||||||| || || ||||| || || ||||| ||||| || || Sbjct 967 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 908 Query 166488 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 166547 ||| || ||||||||||| ||| ||||||||||| || || || ||||||||| | || Sbjct 907 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 848 Query 166548 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 166607 ||| |||||||| || || ||||||||||| || | || | || ||||||||||| Sbjct 847 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 788 Query 166608 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 166667 ||| || || ||||| |||||||| || | ||||| |||| ||||| || | || || Sbjct 787 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 728 Query 166668 CTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGC 166727 ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| || Sbjct 727 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 668 Query 166728 ACACAACTTCCCCCTCGACCTCGCTGCT 166755 ||||||||||| || ||||| |||||| Sbjct 667 TCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 542 bits (600), Expect = 3e-149 Identities = 737/1021 (72%), Gaps = 8/1021 (1%) Strand=Plus/Plus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | || |||||| | |||||| ||||| |||||||| || ||||| || Sbjct 8990 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGC 9049 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| ||||||| | ||| | || |||||| |||| ||||||||||| Sbjct 9050 CTATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTT 9109 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGGTGCGAACTTTC 167191 || || ||||||||| |||||| | || || | ||| | || ||| || |||| Sbjct 9110 GTAACTTCTTGGTATACCCATGGATTGGCTAGTTCC--TATTTGGAAGGTTGCAA-TTTC 9166 Query 167192 TTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGG 167250 ||| | ||||| ||| ||||| || || | | | || ||||| | || |||||| Sbjct 9167 TTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGG 9226 Query 167251 GGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTT 167310 || || ||| | || |||||||| | ||| ||| | || || || ||| ||||| Sbjct 9227 GGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTT 9286 Query 167311 GTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCT 167370 || || ||||| || || ||||| || || ||||||||| | || || |||||||||||| Sbjct 9287 GTCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 9346 Query 167371 CGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTT 167429 || ||| | | | || || || ||||| ||| | ||||||||||| || || || || Sbjct 9347 CGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTT 9405 Query 167430 CGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTT 167489 ||| ||| |||||| | ||||| || || ||| | ||||||||||| ||| || Sbjct 9406 TGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTT 9465 Query 167490 CGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACT 167549 || || || || || || ||||| |||| ||| |||||||||| || || ||||| | Sbjct 9466 TGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTT 9525 Query 167550 GAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAAT 167609 ||| ||||||||||||||||| || || || | | || | || |||| | || || Sbjct 9526 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTAT 9585 Query 167610 CCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAA 167669 |||||| | ||| ||||| || ||| | | ||||||||||| ||||| || || Sbjct 9586 CCATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCG 9645 Query 167670 GGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTG 167729 || || | | ||||| | ||||| |||||||||||||| || || ||||| || || Sbjct 9646 CGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTG 9705 Query 167730 GTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATT 167789 ||| || ||||| || ||||||| ||| ||||| ||| | |||||||||||| |||| Sbjct 9706 GTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATT 9765 Query 167790 CGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCT 167849 || ||||| | || | |||| | |||||| | |||| |||||||| || || Sbjct 9766 TGTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCT 9825 Query 167850 TCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAAC 167909 ||||| || || |||||||| || || ||| | || ||||| ||||| || ||||| || Sbjct 9826 ACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGAC 9885 Query 167910 TTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGA 167969 |||||| || ||||| || ||| | || || ||| |||| || ||| | ||| || || Sbjct 9886 TTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGA 9945 Query 167970 TCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATA 168029 ||| |||||||| || || | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 9946 TCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTA 10005 Query 168030 A 168030 | Sbjct 10006 A 10006 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 99760 CTCCCCTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 99701 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 99700 GGTTCGAATCCTACTTGGGGAG 99679 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 115660 CTCCCCTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 115719 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 115720 GGTTCGAATCCTACTTGGGGAG 115741 >seq14 Length=147140 Score = 596 bits (660), Expect = 2e-165 Identities = 725/988 (73%), Gaps = 0/988 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 81972 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 81913 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 |||||| || || | ||| | |||||| | || || ||||||||||||||||||| Sbjct 81912 GATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 81853 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 || || || || || || || ||||| || || |||||||| | | ||||| ||||| Sbjct 81852 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 81793 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 || || |||||||| || |||| |||| || || || | || || || || || Sbjct 81792 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 81733 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGT 166067 |||||||| ||||| |||| |||||| | || || || ||||||| | || |||| Sbjct 81732 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 81673 Query 166068 CTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 166127 | |||||| | |||| | | || |||||||||||||||||||| || ||| Sbjct 81672 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 81613 Query 166128 TCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGC 166187 ||| |||||||| || ||||| |||||| || ||||| || || || ||||| | ||| Sbjct 81612 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 81553 Query 166188 AGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAAT 166247 || ||| | | |||||| | |||||||| ||||||||||||| ||||| | ||||| Sbjct 81552 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 81493 Query 166248 CTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCC 166307 || || || ||||||| ||| | || ||||| || |||||||| || || |||||||| Sbjct 81492 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 81433 Query 166308 CTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGG 166367 || || ||| | || || ||||| ||||| || || | || ||||||||||| || Sbjct 81432 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 81373 Query 166368 AAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGG 166427 ||||| || ||| | | | || || || ||||||| || || || | || Sbjct 81372 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 81313 Query 166428 TTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGG 166487 |||||| || || ||||||||||| || || ||||| || || ||||| ||||| || || Sbjct 81312 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 81253 Query 166488 TCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGC 166547 ||| || ||||||||||| ||| ||||||||||| || || || ||||||||| | || Sbjct 81252 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 81193 Query 166548 TGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAA 166607 ||| |||||||| || || ||||||||||| || | || | || ||||||||||| Sbjct 81192 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 81133 Query 166608 CCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACAC 166667 ||| || || ||||| |||||||| || | ||||| |||| ||||| || | || || Sbjct 81132 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 81073 Query 166668 CTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGC 166727 ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| || Sbjct 81072 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 81013 Query 166728 ACACAACTTCCCCCTCGACCTCGCTGCT 166755 ||||||||||| || ||||| |||||| Sbjct 81012 TCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 533 bits (590), Expect = 2e-146 Identities = 736/1020 (72%), Gaps = 10/1020 (1%) Strand=Plus/Plus Query 167015 TTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGAC 167074 ||||| | | || |||||| | |||||| ||||| |||||||| || ||||| || | Sbjct 89662 TTGATATTATGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCC 89721 Query 167075 TTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTCG 167134 | | || ||||| ||||||| | ||| | || |||||| |||| ||||||||||| | Sbjct 89722 TATTGCTCTTTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTG 89781 Query 167135 TCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGGTGCGAACTTTCT 167192 | || ||||||||| |||||| | || || | ||| | || ||| || ||||| Sbjct 89782 TAACTTCTTGGTATACCCATGGATTGGCTAGTTCC--TATTTGGAAGGTTGCAA-TTTCT 89838 Query 167193 TA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATGGG 167251 || | ||||| ||| ||||| || || | | | || ||||| | || ||||||| Sbjct 89839 TAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 89898 Query 167252 GTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTTTG 167311 | || ||| | || |||||||| | ||| ||| | || || || ||| |||||| Sbjct 89899 GCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTG 89958 Query 167312 TGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTC 167371 | || ||||| || || ||||| || || ||||||||| | || || ||||||||||||| Sbjct 89959 TCGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 90018 Query 167372 GC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTC 167430 | ||| | | | || || || ||||| ||| | ||||||||||| || || || || Sbjct 90019 GGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTT 90077 Query 167431 GTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTC 167490 ||| ||| |||||| | ||||| || || ||| | ||||||||||| ||| || Sbjct 90078 GTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTT 90137 Query 167491 GGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACTG 167550 || || || || || ||| |||| |||| ||| |||||||||| || || ||||| || Sbjct 90138 GGCGTAGCAGCTATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTG 90196 Query 167551 AATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATC 167610 || ||||||||||||||||| || || || | | || | || |||| | || ||| Sbjct 90197 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATC 90256 Query 167611 CATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAG 167670 ||||| | ||| ||||| || ||| | | ||||||||||| ||||| || || Sbjct 90257 CATGGGGCTACCGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGC 90316 Query 167671 GCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGG 167730 || || | | ||||| | ||||| |||||||||||||| || || ||||| || ||| Sbjct 90317 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGG 90376 Query 167731 TCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTC 167790 || || ||||| || ||||||| ||| ||||| ||| | |||||||||||| |||| Sbjct 90377 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 90436 Query 167791 GTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTT 167850 || ||||| | || | |||| | |||||| | |||| |||||||| || || Sbjct 90437 GTACCCGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTA 90496 Query 167851 CGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACT 167910 ||||| || || |||||||| || || ||| | || ||||| ||||| || ||||| ||| Sbjct 90497 CGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 90556 Query 167911 TTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGAT 167970 ||||| || ||||| || ||| | || || ||| |||| || ||| | ||| || ||| Sbjct 90557 TTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCT-CAGAT 90615 Query 167971 CAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 || |||||||| || || | ||||| ||||| ||||| ||||| || ||||| || ||| Sbjct 90616 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 90675 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 44204 CTCCCCTTGTTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 44145 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| ||||||| Sbjct 44144 GGTTCGAATCCTACTTGGGGAG 44123 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||||| |||||||||||||||| || ||||| ||| ||||||| || |||||||| Sbjct 60588 CTCCCTTG-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 60646 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 60647 -GTTCGAATCCTACTTGGGGAG 60667 >seq4 Length=40407879 Score = 419 bits (464), Expect = 3e-112 Identities = 609/851 (72%), Gaps = 8/851 (1%) Strand=Plus/Plus Query 167184 GAACTTTCTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTC 167242 ||| ||||||| | ||||| ||| ||||| || || | | | || ||||| | | Sbjct 27919942 GAAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGC 27920001 Query 167243 TTCTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCT 167302 | |||||||| || ||| | || |||||||| | ||| ||| | || || || | Sbjct 27920002 TACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGT 27920061 Query 167303 GGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTG 167362 || |||| || || ||||| || || ||||| || || |||||||| | || || |||| Sbjct 27920062 GGACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTG 27920120 Query 167363 AACTTGCTCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATT 167421 |||||||||| ||| | | | || || || ||||| ||| | |||||| |||| || Sbjct 27920121 AACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATC 27920179 Query 167422 GCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCC 167481 || || || ||| ||| |||||| | ||||| || || ||| | ||||||||||| Sbjct 27920180 GCAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCG 27920239 Query 167482 CCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAAC 167541 ||| || || || || || || || ||||| |||| ||| |||||||||| || || Sbjct 27920240 CCGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAAT 27920299 Query 167542 TGGACACTGAATCCATTTCATATGATGGGTGTAG-CAG-GTATCCTGGGTGGTGCATTGC 167599 ||||| |||| ||||||||||||||||| || | ||| |||| | |||| || ||| Sbjct 27920300 TGGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTAT--TAGGTGTAGCTCTGC 27920357 Query 167600 TTTCTGCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAA 167659 | | || |||||||| | ||| ||||| || ||| | | |||||||||||| |||| Sbjct 27920358 TATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAA 27920417 Query 167660 ACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAA 167719 | || ||| || || | | ||||| || ||||| |||||||||||||| | || | Sbjct 27920418 ATACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTA 27920477 Query 167720 ACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCT 167779 |||| || ||||| || ||||| || ||||||| ||| |||| ||| | ||||||| Sbjct 27920478 ACCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCT 27920537 Query 167780 TTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGG 167839 ||||| |||| || ||||| | | | |||| | |||||| | |||| ||| Sbjct 27920538 TTATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGG 27920597 Query 167840 CTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAG 167899 |||| || || | ||| || || ||| |||| || || ||| | || ||||| ||||| | Sbjct 27920598 CTCTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTG 27920657 Query 167900 AGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAG 167959 | ||||| |||||||| || ||||| || ||| | || | ||| || | || ||| | | Sbjct 27920658 AATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGG 27920717 Query 167960 CACCTATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCA 168019 || || ||||| |||||||| || || | ||||| ||||| ||||| ||| | || | Sbjct 27920718 CAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAA 27920777 Query 168020 ACGCACTATAA 168030 |||| || ||| Sbjct 27920778 ACGCTCTTTAA 27920788 >seq7 Length=35964315 Score = 282 bits (312), Expect = 5e-71 Identities = 335/454 (74%), Gaps = 0/454 (0%) Strand=Plus/Plus Query 166300 ATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCT 166359 |||||||| || || ||| | || || ||||| ||||| || || | || |||||| Sbjct 24459263 ATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCT 24459322 Query 166360 ATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAA 166419 ||||| || ||||| || | | | | | || || || ||||||| || || Sbjct 24459323 ATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCT 24459382 Query 166420 AACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGT 166479 || | |||||||| || || |||||||||| | || ||||| || || ||||||||| Sbjct 24459383 AATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCTCATGGT 24459442 Query 166480 TACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTC 166539 || || ||||| || ||||||||||| ||| ||||||||||| | || || |||||| Sbjct 24459443 TATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTACACTTC 24459502 Query 166540 TTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATG 166599 ||| | ||||| |||||||| || || ||||||||||| || | || | || ||| Sbjct 24459503 TTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATG 24459562 Query 166600 GCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTG 166659 ||||||||||| || |||||||| |||||||| || | ||||| |||| ||||| || Sbjct 24459563 GCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTT 24459622 Query 166660 TTGAACACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAG 166719 | || || ||||| ||| | ||||| ||| ||| ||||||||||| ||||| || Sbjct 24459623 ATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAA 24459682 Query 166720 CGTAACGCACACAACTTCCCCCTCGACCTCGCTG 166753 ||||| || ||||||||||| || ||||| |||| Sbjct 24459683 CGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 154 bits (170), Expect = 2e-32 Identities = 189/257 (74%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 167683 ACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTC 167742 ||||| | ||||| |||||||||||||| | || ||||| || |||||||| || || Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 167743 GGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATG 167802 || ||||||| ||| ||| | ||| | |||||||||||| |||| || ||||| | Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCA-C 27067251 Query 167803 GGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGAT 167862 || | |||| | | |||||| | | || |||||||| || || ||||| || || Sbjct 27067252 CGATTATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 167863 TTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAA 167922 ||| |||| || || ||| | || ||||| ||||| || ||| | |||||||| || ||| Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 167923 AACATCCTTCTGAATGA 167939 || || ||| | || || Sbjct 27067372 AATATTCTTTTAAACGA 27067388 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 ||| ||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 14639605 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 14639663 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 14639664 GTTCGAATCCTACTTGGGGAG 14639684 >seq12 Length=360304 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 ||| ||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 275774 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 275832 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 275833 GTTCGAATCCTACTTGGGGAG 275853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561245635742800