Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq337 724 0.0 seq14 724 0.0 seq4 480 9e-131 seq7 347 1e-90 seq1 176 5e-39 seq8 93.3 5e-14 seq12 87.8 2e-12 >seq337 Length=135516 Score = 724 bits (802), Expect = 0.0 Identities = 757/989 (77%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898 |||||| ||||| |||||||||||||| || ||||| || ||||| ||||||||||| | Sbjct 640 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 699 Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958 | ||| ||||||| | || ||||| ||| | ||| ||| |||||||| | Sbjct 700 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 759 Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018 ||| |||||||| ||||| ||||| |||||||||||||| || |||| ||| | ||||| Sbjct 760 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 819 Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078 ||||||||| || || |||||||| ||||| | ||||||||| | ||||| |||||||| Sbjct 820 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 879 Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138 ||| ||||| |||||||| | ||||| || || || || ||||| |||||||| || Sbjct 880 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 939 Query 68139 AGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTC 68198 |||||||||||||||||| || |||||||| | || |||||| ||||||||||||| Sbjct 940 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 999 Query 68199 ACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAA 68258 | | || ||| || |||| |||||||||||| |||||||| || || || || || Sbjct 1000 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 1059 Query 68259 TACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 68318 ||| ||||| || || | ||| || || || ||||| |||||||||||||| || ||||| Sbjct 1060 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 1119 Query 68319 CACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACC 68378 || | ||| |||||||||||||||| || || | |||||| | |||||||| || Sbjct 1120 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 1179 Query 68379 TTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGC 68438 |||||| | |||||| | || ||| || || | || ||||||||||| || || ||||| Sbjct 1180 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 1239 Query 68439 AACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTA 68498 |||| |||||||| |||||||| ||||| | ||||||||| ||||| ||||| || Sbjct 1240 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 1299 Query 68499 TGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAA 68558 | | ||||| | |||||| | | | || | ||||||| |||||||| || Sbjct 1300 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 1359 Query 68559 CCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGA 68618 ||| ||||||| | ||| ||||||||||| || ||||| || | || || || || Sbjct 1360 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 1419 Query 68619 ACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGG 68678 | |||||| || |||||||||||| || ||||| ||||| || | ||||||| |||||| Sbjct 1420 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 1479 Query 68679 TTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGA 68737 |||||||||||||| || || || || ||||||||||||||||||| || || || || Sbjct 1480 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 1539 Query 68738 TGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGG 68796 ||||| | ||| || ||||||||||||| || |||||||| || | |||||| ||| Sbjct 1540 -AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGG 1597 Query 68797 TTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 || || ||| ||| | ||| | |||||| Sbjct 1598 TTTTCGGTGCTAGTTATCCAGTTGCAGAA 1626 Score = 576 bits (638), Expect = 2e-159 Identities = 736/1010 (73%), Gaps = 8/1010 (1%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || ||||| || || ||||||| || |||||||| || | Sbjct 10007 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCT 9948 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||| ||||||| ||| || || || ||||| || || ||||||| Sbjct 9947 GATCCTGAGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGA 9888 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || ||||| || |||||||| |||| Sbjct 9887 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 9828 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| ||||| || |||| | || || | ||| |||| | ||| | || || | Sbjct 9827 GTAGGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTA 9768 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| | |||||||||||| ||||| | |||||| ||| |||| ||||||||| || | Sbjct 9767 CAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 9708 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| |||||||| ||||| |||||||| ||||||||||| ||||||| | || || | Sbjct 9707 ACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 9648 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| || ||||| ||||||||||| | ||||| || ||||| ||| | |||| Sbjct 9647 CGCGGAAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCAT 9588 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 | || || | |||| || | || | | || || || |||||||||||||| |||| Sbjct 9587 GGATAGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGT 9528 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 |||| ||||| ||||| |||||||| | ||| || | |||||||| || |||| || | Sbjct 9527 TCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTACGC 9468 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| || || || ||||||| ||||| ||||| || || || || || || || Sbjct 9467 CAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAA 9408 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244 ||||||| ||||| ||||||||||| | ||| ||||| || || || | | || ||| Sbjct 9407 CAAAAACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGAC 9349 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || || |||||||| || || | ||||||||| ||||| || |||||||| ||||| || Sbjct 9348 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCG 9289 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 |||||| |||| || || || | ||| ||| || ||||||||||| | || || Sbjct 9288 ACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGG 9229 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424 ||||| ||||| | | ||| || | | | || ||||| || || || ||||| || Sbjct 9228 CCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTT 9169 Query 67425 AGAAAATTAGCACCCTCAAGAT---AACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTG 67481 | ||||| ||| || | || ||||| || | ||| || || ||||| || Sbjct 9168 AAGAAATTGCAACCTTCCAAATAGGAACTA---GCCAATCCATGGGTATACCAAGAAGTT 9112 Query 67482 ACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGT 67541 ||||| ||||| || |||| ||| || || | || | ||||||| ||||| || | | Sbjct 9111 ACAAAAGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAAT 9052 Query 67542 AGTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 || || ||||| || ||||| || || || || | | | |||||| || Sbjct 9051 AGGCCGGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTC 9002 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 99671 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 99728 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 99729 TCTACCACTGAGCTACTGAGGA 99750 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 115749 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 115692 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 115691 TCTACCACTGAGCTACTGAGGA 115670 >seq14 Length=147140 Score = 724 bits (802), Expect = 0.0 Identities = 757/989 (77%), Gaps = 4/989 (0%) Strand=Plus/Plus Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898 |||||| ||||| |||||||||||||| || ||||| || ||||| ||||||||||| | Sbjct 80985 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 81044 Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958 | ||| ||||||| | || ||||| ||| | ||| ||| |||||||| | Sbjct 81045 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTAC 81104 Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018 ||| |||||||| ||||| ||||| |||||||||||||| || |||| ||| | ||||| Sbjct 81105 AGATTGGTTGAAATTGAATCCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGT 81164 Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078 ||||||||| || || |||||||| ||||| | ||||||||| | ||||| |||||||| Sbjct 81165 GAACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 81224 Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138 ||| ||||| |||||||| | ||||| || || || || ||||| |||||||| || Sbjct 81225 GAAACTAGCATATTGGAAGATTAATCGACCAAAATAACCGTGAGCAGCCACAATGTTATA 81284 Query 68139 AGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTC 68198 |||||||||||||||||| || |||||||| | || |||||| ||||||||||||| Sbjct 81285 AGTCTCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTC 81344 Query 68199 ACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAA 68258 | | || ||| || |||| |||||||||||| |||||||| || || || || || Sbjct 81345 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 81404 Query 68259 TACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 68318 ||| ||||| || || | ||| || || || ||||| |||||||||||||| || ||||| Sbjct 81405 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTGTGCTCCGCCTGGAA 81464 Query 68319 CACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACC 68378 || | ||| |||||||||||||||| || || | |||||| | |||||||| || Sbjct 81465 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 81524 Query 68379 TTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGC 68438 |||||| | |||||| | || ||| || || | || ||||||||||| || || ||||| Sbjct 81525 TTGACCAATAGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 81584 Query 68439 AACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTA 68498 |||| |||||||| |||||||| ||||| | ||||||||| ||||| ||||| || Sbjct 81585 AACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATA 81644 Query 68499 TGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAA 68558 | | ||||| | |||||| | | | || | ||||||| |||||||| || Sbjct 81645 ACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTATAA 81704 Query 68559 CCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGA 68618 ||| ||||||| | ||| ||||||||||| || ||||| || | || || || || Sbjct 81705 CCATTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAATGCAATCCGATCGCCGCAGA 81764 Query 68619 ACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGG 68678 | |||||| || |||||||||||| || ||||| ||||| || | ||||||| |||||| Sbjct 81765 AGTAGGAATAATAGCACCAGAAATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGG 81824 Query 68679 TTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGA 68737 |||||||||||||| || || || || ||||||||||||||||||| || || || || Sbjct 81825 CTCACGAATACCATCAATATCTACTGGAGGAGCAGCGATGAAGGCGATAATAAATACGGA 81884 Query 68738 TGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGG 68796 ||||| | ||| || ||||||||||||| || |||||||| || | |||||| ||| Sbjct 81885 -AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGACGG 81942 Query 68797 TTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 || || ||| ||| | ||| | |||||| Sbjct 81943 TTTTCGGTGCTAGTTATCCAGTTGCAGAA 81971 Score = 563 bits (624), Expect = 1e-155 Identities = 735/1010 (73%), Gaps = 10/1010 (1%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || ||||| || || ||||||| || |||||||| || | Sbjct 90676 ATTAAAGAGCGTTTCCACGTGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCT 90617 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||| ||||||| ||| || || || ||||| || || ||||||| Sbjct 90616 GATCTG-AGCTGCCATCCACGCACGAATACCCTCGTTTAAAAGAATATTTTTGGTGTAGA 90558 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || ||||| || |||||||| |||| Sbjct 90557 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 90498 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| ||||| || |||| | || || | ||| |||| | ||| | || || | Sbjct 90497 GTAGGTTCAGAGCCAGGCCAACTACGCCAATAGCACTCATCCATAAACCGGTGACGGGTA 90438 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| | |||||||||||| ||||| | |||||| ||| |||| ||||||||| || | Sbjct 90437 CAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 90378 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| |||||||| ||||| |||||||| ||||||||||| ||||||| | || || | Sbjct 90377 ACCAAAAGCGGTTAGCAGTGACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAG 90318 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||| || ||||| ||||||||||| | ||||| || ||||| ||| | |||| Sbjct 90317 CGCGGAAGGTATTTGCACCATCACCATCTTCGAATAGAGTGTTTTCTACGGTAGCCCCAT 90258 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 | || || | |||| || | || | | || || || |||||||||||||| |||| Sbjct 90257 GGATAGCGCATAGCAGAGCTGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGT 90198 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 |||| ||||| ||||| |||||||| | ||| || | ||||| || || |||| || | Sbjct 90197 TCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCG-AATATAGCTGCTACGC 90139 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | ||| || || || ||||||| ||||| ||||| || || || || || || || Sbjct 90138 CAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGAAA 90079 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA- 67244 ||||||| ||||| ||||||||||| | ||| ||||| || || || | | || ||| Sbjct 90078 CAAAAACTGCGATTGGACCAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGAC 90020 Query 67245 CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCC 67304 || || |||||||| || || | ||||||||| ||||| || |||||||| ||||| || Sbjct 90019 CGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCG 89960 Query 67305 ACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGA 67364 |||||| |||| || || || | ||| ||| || ||||||||||| | || || Sbjct 89959 ACAAAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCGGG 89900 Query 67365 CCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTG 67424 ||||| ||||| | | ||| || | | | || ||||| || || || ||||| || Sbjct 89899 CCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGGTT 89840 Query 67425 AGAAAATTAGCACCCTCAAGAT---AACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTG 67481 | ||||| ||| || | || ||||| || | ||| || || ||||| || Sbjct 89839 AAGAAATTGCAACCTTCCAAATAGGAACTA---GCCAATCCATGGGTATACCAAGAAGTT 89783 Query 67482 ACAAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGT 67541 ||||| ||||| || |||| ||| || || | || | ||||||| ||||| || | | Sbjct 89782 ACAAAAGTAGTCCCTGTAAACCAACCCCCTAAAGCGAAATAAGCACAAGGAAAGAGCAAT 89723 Query 67542 AGTCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 || || ||||| || ||||| || || || || | | | |||||| || Sbjct 89722 AGGCCGGACCATCCTACAAAAACGAAACGGTCCCTTCGTAACCAGTCGTC 89673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 44115 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 44172 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 44173 TCTACCACTGAGCTACTGAGGA 44194 >seq4 Length=40407879 Score = 480 bits (532), Expect = 9e-131 Identities = 621/850 (73%), Gaps = 7/850 (1%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || |||| || ||||| || || ||||||| || |||||||| || | Sbjct 27920789 ATTAAAGAGCGTTTCCACATGGTAGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCT 27920730 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||| |||| || ||| | || || ||||| || || ||||||| Sbjct 27920729 GATCCTGAGCTGCCATCCACGCACAAATACCCTGGTTTAAAAGAATATTTTTGGTGTAGA 27920670 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || ||||| | |||||||| ||| Sbjct 27920669 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAATGAAGTCATAGGCAT 27920610 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| ||||| | |||| | || || | ||| |||| | || | || || | Sbjct 27920609 GTAGGTTCAGAGCCAAGCCAACTACGCCAATAGCACTCATCCATAAACTGGTGACGGGTA 27920550 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| | |||||||||||| ||||| |||||| ||| |||| ||||||||| || | Sbjct 27920549 CAAATAGCATAAAGAAATGTAACCAATGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 27920490 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| |||||||| ||| | |||||||| ||||||||||| |||||||| | || || | Sbjct 27920489 ACCAAAAGCGGTTAGCAATGACCATTGAATAAGTTTCTTCATCTTGAGTTGGGTTAAAAG 27920430 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | || || ||||| |||||||||||| | ||||| || ||||| ||| | |||| Sbjct 27920429 CGCGAAAGGTATTTGCACCATCACCATCTTCAAATAGAGTGTTTTCTACAGTAGCCCCAT 27920370 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATAC-CTG-CTACACCCATCATATGAAACGG 67063 | || || | |||| || |||| | |||| ||| | || |||||||||||||| || Sbjct 27920369 GGATAGCGCATAGCAGAGCTACACCTA--ATACTCTGGCAACTCCCATCATATGAAATGG 27920312 Query 67064 GTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGAC 67123 |||||| ||||| ||||| |||||||| | ||| || | |||||||| || |||| || Sbjct 27920311 GTTCAACGTCCAATTATGAAATCCTTGGAAGAAAAGGATAAATCGAAATATAGCTGCTAC 27920252 Query 67124 CCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACT 67183 || ||| || || || ||||||| ||||| ||||| || || || || || || Sbjct 27920251 GCCAAAACTCGGCGCAAAGAACCAACCAGATTGTCCCAGTGGATAAATAAGGAATACGGA 27920192 Query 67184 AACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAG 67243 ||||||||| ||||| |||| |||||| | ||| ||||| || || || | | || || Sbjct 27920191 AACAAAAACTGCGATTGGACTAGAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAG 27920133 Query 67244 A-CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCG 67302 | || || |||||||| || || | |||||||| ||||| || |||||||| ||||| | Sbjct 27920132 ACCGAGCAAGTTCAAATTGACGTAACATGAAACTTATTAGTGCAAAAGCCCCATGGAGAG 27920073 Query 67303 CCACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAG 67362 | || ||| |||| || || || | ||| ||| || ||||||||||| | || | Sbjct 27920072 CGAC-AAAGTCCACAGACCACCTAATTGACACCAACGAGTAAAATCCCCCTGTGCTTCCG 27920014 Query 67363 GACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTG 67422 | ||||| ||||| | | ||| || | | | || ||||| || || || ||||| | Sbjct 27920013 GGCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGAGTGGAAACCGCCGCGG 27919954 Query 67423 TGAGAAAATT 67432 | | ||||| Sbjct 27919953 TTAAGAAATT 27919944 >seq7 Length=35964315 Score = 347 bits (384), Expect = 1e-90 Identities = 353/460 (77%), Gaps = 0/460 (0%) Strand=Plus/Minus Query 67841 CAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAAC 67900 |||| ||||| |||||||||||||| || ||||| || ||||| ||||||||||| | | Sbjct 24459716 CAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGAT 24459657 Query 67901 CAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAG 67960 ||| |||||| | || ||||| ||| | ||| ||| |||||||| | || Sbjct 24459656 TAGCACGGTTGGTGATATCAGCCCAAGTATTAATAACGCGACCTTGACTATCAACTACAG 24459597 Query 67961 ACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGA 68020 | |||||||| ||||||||||| |||||||||||||| || |||| ||| | ||||||| Sbjct 24459596 ATTGGTTGAAATTGAAACCATTTAGGTTGAATGCCATAGTACTAATACCTAAAGCAGTGA 24459537 Query 68021 ACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 68080 ||||||| || || |||||||| ||||| | ||||||||| | |||| |||||||||| Sbjct 24459536 ACCAGATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACAAGAGTTGTTGA 24459477 Query 68081 ACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAG 68140 | ||||| |||||||| | ||||| || || ||||| ||||| |||||||| ||| Sbjct 24459476 AACTAGCATATTGGAAGATTAATCGACCAAAATAACCATGAGCAGCCACAATGTTATAAA 24459417 Query 68141 TCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCAC 68200 || ||||||||||||| || |||||||| | || |||||| ||||||||||||| | Sbjct 24459416 TCCCTTCTTCTTGACCAAATTTGTAACCCTCATTAGCAGACTCATTTTCAGTGGTTTCCC 24459357 Query 68201 GAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATA 68260 | || | | || |||| |||||||||||| |||||||| || || || || |||| Sbjct 24459356 TGATCAAACTATAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATA 24459297 Query 68261 CGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGAT 68300 | ||||| || || | ||| || || || ||||| | ||| Sbjct 24459296 CACCAGCTACACCTAACATGTGAAATGGATGCATAATGAT 24459257 >seq1 Length=42145699 Score = 176 bits (194), Expect = 5e-39 Identities = 194/257 (75%), Gaps = 1/257 (0%) Strand=Plus/Minus Query 66678 TCATTCAATAGAATGTTCTTTGTGTAGAACGTCTCGAACTCTGGGTCTTCTGCTGCTCTG 66737 || || || ||||| || || |||||||| |||| || || || ||||| ||||| | | Sbjct 27067388 TCGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTAAAATTCAGGATCTTCCGCTGCACGG 27067329 Query 66738 ATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATG 66797 || || ||||| | |||||||| ||||| ||||| ||||| || || | | || || Sbjct 27067328 ATTTCATGGGAAATGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCTACTACGCCAATA 27067269 Query 66798 GAACTTGTCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTA 66857 | | | |||| | | | | || || ||||| | |||||||||||| ||||| | ||| Sbjct 27067268 GCAGTCATCCATA-ATCGGTGACGGGTACAAATAGCATAAAGAAATGTAACCAACATTTA 27067210 Query 66858 TTGCTAAACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAA 66917 ||| ||| |||| |||||| || |||||||| |||||||| ||| | |||||||| ||| Sbjct 27067209 TTGGAAAAAGCAACACCAAATATTTGAGACCACAAGCGGTTAGCAATGACCATTGAATAA 27067150 Query 66918 GTTTCTTCCTCTTGAGT 66934 |||||||| ||||||| Sbjct 27067149 GTTTCTTCAGCTTGAGT 27067133 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 14639692 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 14639635 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 14639634 TCTACCACTGAGCTACTGAGGA 14639613 >seq8 Length=40689132 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68106 ACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTA 68165 ||| || || || || ||||| |||||||| |||||| ||||||||||||| || ||||| Sbjct 1980181 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCAAATTTGTA 1980240 Query 68166 ACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGA 68225 ||| | || |||||| ||||||||||||| | | || ||| || |||| ||| Sbjct 1980241 ACCCTTATTAGCAGACTCATTTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGA 1980300 Query 68226 ACCATG 68231 ||| || Sbjct 1980301 ACCGTG 1980306 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68106 ACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTA 68165 ||| || || || || ||||| |||||||| |||||| ||||||||||||| || ||||| Sbjct 30663629 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCTAATTTGTA 30663688 Query 68166 ACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGA 68225 ||| | || |||||| ||||| ||||||| | | || ||| || |||| ||| Sbjct 30663689 ACCCTTATTAGCAGACTCATTTTCACTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGA 30663748 Query 68226 ACCATG 68231 ||| || Sbjct 30663749 ACCGTG 30663754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 68106 ACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTA 68165 ||| || || || || ||||| |||||||| |||||| ||||||||||||| || ||||| Sbjct 30734480 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCAAATTTGTA 30734539 Query 68166 ACCATAGTTCTGGGACTCAGTTTCAGTGGTTTC 68198 ||| | || |||||| ||||||||||||| Sbjct 30734540 ACCCTTATTAGCAGACTCATTTTCAGTGGTTTC 30734572 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68106 ACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTA 68165 ||| || || || || ||||| |||||||| |||||| ||||||||||||| || ||||| Sbjct 30740264 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCAAATTTGTA 30740323 Query 68166 ACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGA 68225 ||| | || ||||| ||||||||||||| | || ||| || |||| ||| Sbjct 30740324 ACCCTTATTAGCATACTCATTTTCAGTGGTTTCCGTGATCAAACTAGAGGTTACCAAGGA 30740383 Query 68226 ACCATG 68231 ||| || Sbjct 30740384 ACCGTG 30740389 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 68106 ACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCTTCTTGACCGAACTTGTA 68165 ||| || || || || ||||| |||||||| |||||| ||||||||||||| || ||||| Sbjct 30748388 ACCAAAATAACCGTGAGCAGCCACAATGTTATAAGTCCCTTCTTCTTGACCAAATTTGTA 30748447 Query 68166 ACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGA 68225 ||| | || ||||| ||||||||||||| | || ||| || |||| ||| Sbjct 30748448 ACCCTTATTAGCATACTCATTTTCAGTGGTTTCCGTGATCAAACTAGAGGTTACCAAGGA 30748507 Query 68226 ACCATG 68231 ||| || Sbjct 30748508 ACCGTG 30748513 >seq12 Length=360304 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 275861 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 275804 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 275803 TCTACCACTGAGCTACTGAGGA 275782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572051990220840