Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq7 257 3e-62 seq4 230 4e-54 seq5 197 2e-44 seq1 183 5e-40 seq2 179 6e-39 seq6 178 2e-38 seq3 168 1e-35 seq9 147 3e-29 >seq7 Length=35964315 Score = 257 bits (284), Expect = 3e-62 Identities = 251/324 (77%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| |||||| |||||||||||||||||| Sbjct 23911767 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCGCGCTTC 23911826 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||||| ||||||||| ||||||||||| ||| ||| ||| Sbjct 23911827 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCAACGCAGGCGAAG 23911886 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| |||||||| || ||| ||| || |||||| ||| ||||| Sbjct 23911887 GCGACGAGGCGCTCGGCGAAGCGCTCCCCGCCGTC------GATCCAGCGCATGGCCCAG 23911940 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| | ||| | ||| || |||||||||||||| |||||||||||||||||| Sbjct 23911941 TCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGTGGTCCTTCTCG 23912000 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||| || |||||| |||| || |||||||| |||| ||||||||||| ||| Sbjct 23912001 GCGCCGTCGCGGATGTAGGTCTCGAGAAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 23912060 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||||||||| || ||| Sbjct 23912061 ATGGCGATCTGGAAGCCGTAGAAG 23912084 Score = 206 bits (228), Expect = 4e-47 Identities = 235/311 (76%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 ||||| || |||||| |||||| |||||||||||||||| |||||||| | ||||||| Sbjct 23911461 TACTCCCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATGAGCTCCATC 23911520 Query 793968 CACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 || ||| |||||||| ||| ||| ||||| | ||| |||| | ||||||| Sbjct 23911521 CAGTCGAATGGGTTGGCGACGT--TGTACATCTTCTGGTGCCCCAGCGCCATGAGCAGGC 23911578 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCA 794085 ||||||||||||| || |||||||||| |||||| || ||||||| |||| |||||| | Sbjct 23911579 GGTCGGCGACGAACTCGATGTACTGGCTCATGAGCCCGCCGTTCATTCCGACGAGCGCGA 23911638 Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCC 794145 |||| |||| |||| ||| ||||| |||||| |||||||| ||| || ||||| | Sbjct 23911639 CGGGGAGCGCGTCGCAGACGAACTCGCGCTCGATGTCGACGGCGTCGGCGACGATCT-CG 23911697 Query 794146 TGGGCACGTCGGACGACG-GCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCG 794204 || | || | || || ||||| | ||| | |||||| |||||||| |||||| Sbjct 23911698 CGGACGCGGCCCTCGTCGAGCTTGCTGCGGAGGAGGTCGTAGAGGAGGCAGGCGAAGTCG 23911757 Query 794205 CAATGCAGACC 794215 || || || || Sbjct 23911758 CAGTGGAGGCC 23911768 Score = 95.1 bits (104), Expect = 2e-13 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||| || |||||||||| || |||||||| |||||||||| Sbjct 23912091 GCCTCGGCGACCTGGACGTCGGACATGAAGCGGGAGGAGAGGTTCTCGAGCACGATGCCG 23912150 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTC 796259 ||| ||||||||| |||||||| ||||| ||| ||||| |||||||| Sbjct 23912151 TCGGAGGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTC 23912200 Score = 93.3 bits (102), Expect = 7e-13 Identities = 184/262 (70%), Gaps = 19/262 (7%) Strand=Plus/Minus Query 1249571 GGCGTCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAGC 1249630 ||| ||||||| || ||||| | ||||||||| || |||||||||| |||||| || | Sbjct 34113144 GGCCTCGCCTACCTCCACGCCCACGACCCGCCGGTGATCCACCGCGACCTCAAGTGCGAC 34113085 Query 1249631 AACCTGCTGGTCGACG---ACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGC 1249687 ||||||||||| ||| || || | | |||||| | |||||| | || ||||| ||| Sbjct 34113084 AACCTGCTGGTGAACGGGCACCAGGGCCAGGTCAAGATTGCCGACCTGGGCCTCGC-CGC 34113026 Query 1249688 ----ATCCGCGA--GGACAATGCCACCATGACGCGGTGCGGCACGCCGGCGTGGACGGCG 1249741 ||||| | | | | | | || || | ||||||||||| | | |||| Sbjct 34113025 CGTGCTCCGCCATCAGTCGACGGC-GCACAGCGTCAT-CGGCACGCCGGAATTCATGGCG 34112968 Query 1249742 CCCGAGGTCATCCGCGGCGAGCGCTACGACGAGCGCGCCGACGTCTACTCGATCGGCATC 1249801 |||||| || || |||| ||||||||||| | || || ||||| ||||||| Sbjct 34112967 CCCGAG---ATGTACGACGAGGAGTACGACGAGCGGGTGGATGTGTACTCCTTCGGCAT- 34112912 Query 1249802 GTCGCGTG--GGAGGTGCTCAC 1249821 || || || |||| ||||||| Sbjct 34112911 GT-GCATGCTGGAGATGCTCAC 34112891 >seq4 Length=40407879 Score = 230 bits (254), Expect = 4e-54 Identities = 245/324 (76%), Gaps = 6/324 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||| | |||||| ||| |||||| |||||||| || |||||| Sbjct 10866109 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 10866168 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||||| ||||||||| ||||| ||||||||| ||| || Sbjct 10866169 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATTCCCTCGACGCAGGCGAAC 10866228 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 ||||||| |||||||| || ||| ||| || ||||| ||| ||||| Sbjct 10866229 GCGACGAGTCGCTCGGCGAAGCGCTCCCCGCCGTCA------ATCCAGCGCATGGCCCAG 10866282 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| | || | ||| || |||||||||||||| |||||| ||||||||||| Sbjct 10866283 TCGGCCTTGCGGCGTACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 10866342 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||| || |||||| |||| || |||||||| |||| ||||||||||| ||| Sbjct 10866343 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCCGAGTGGATGTTCTCG 10866402 Query 794641 ATGGCGATCTGGAAGCCATAAAAG 794664 ||||||||||||||||| || ||| Sbjct 10866403 ATGGCGATCTGGAAGCCGTAGAAG 10866426 Score = 217 bits (240), Expect = 2e-50 Identities = 235/309 (76%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||||| |||||| |||||| ||||| |||||||||| |||||||| | ||||||| Sbjct 10865803 TAGTCGCCGACGCGCTTCTCGAAGAAGTTTGTCTTGCCCTGCAGCGAGATGAGCTCCATC 10865862 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 || || |||||||| | ||| ||||| ||||||||| | | ||||||||| Sbjct 10865863 CAGTCAAAGGGGTTGGCGGCGTTGTACATCTTCTTGCACCCGAGAGCCATGAGCAGGCGG 10865922 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || |||||||| || |||||||||| ||| || ||| |||||||||||| |||||| ||| Sbjct 10865923 TCTGCGACGAACTCGATGTACTGGCTCATTAGCGCGCCGTTCATGCCGACGAGCGCGACG 10865982 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTG 794147 || |||| |||| |||||||||| |||||| |||||||| ||| || ||||| | | Sbjct 10865983 GGGAGCGCGTCGCAGACAAACTCTCGCTCGATGTCGACGGCGTCGGCGACGATCT-CGCG 10866041 Query 794148 GGCACGTCGGACGACG-GCTTGTCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 794206 | | || | || || ||||| | ||| | |||||| ||||| || |||||||| Sbjct 10866042 GACGCGGGGCTCGTCGAGCTTGCTGCGGAGGAGGTCGTAGAGGAGGCACGCGAAGTCGCA 10866101 Query 794207 ATGCAGACC 794215 ||||| || Sbjct 10866102 GTGCAGGCC 10866110 Score = 176 bits (194), Expect = 7e-38 Identities = 179/233 (77%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||||| || || || || |||||||||| || |||||||| ||||||||| Sbjct 10866432 GGCCTCGGCGACCTGCACGTCGGACATGAAGCGGGACGCGAGGTTCTCGAGCACGATGCC 10866491 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 |||| ||||||||| |||||||| ||||| ||| ||||| ||||||||| | ||| Sbjct 10866492 GTCGGAGGCGGCGAAGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAGAG 10866551 Query 796269 CGA---GACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 || | |||||||| || ||||||| |||||| ||||||||||| ||||| ||||| Sbjct 10866552 CGCCTCGTCCCAGTGGCGCGCGTCGGCGGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGA 10866611 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378 ||| | ||||| ||||| | |||||| ||| | || | ||||| ||||||| Sbjct 10866612 CGCCACCGCCTTCTTGTAGAACTCCCAGATCTGCGGGAACCGGATCGGGAACA 10866664 >seq5 Length=47252588 Score = 197 bits (218), Expect = 2e-44 Identities = 187/239 (78%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||||||||| |||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 41016491 TGAACTTGGTGACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 41016550 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||| | |||||||||||| |||| | ||| ||| |||||| || Sbjct 41016551 GGACGAGGCGCACCGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 41016610 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| |||||| ||||||| | ||| |||| |||||||||| |||||||||| Sbjct 41016611 GCGCGAGGCGGGCGGCCTCCTGGGCGAGCTTCTCGAAGATGTCGTTGATGAACGAGTTCA 41016670 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| |||||| || | ||| |||||||||||||||||||||||| Sbjct 41016671 TGATGGACATGGCCTTGGAGGAGATACCAATGTCCGGGTGCACCTGCTTGAGCACCTTG 41016729 Score = 183 bits (202), Expect = 5e-40 Identities = 184/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||||||||| |||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 9079893 TGAACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 9079952 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| |||| |||||||||||| |||| | ||| ||| |||||| || Sbjct 9079953 GGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 9080012 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || | ||||||| | ||| |||| |||||||||| || ||||||| Sbjct 9080013 GCGCGAGCTTGGCGGCCTCACCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 9080072 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | |||||||||||||||||| ||||||||| Sbjct 9080073 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTG 9080131 Score = 183 bits (202), Expect = 5e-40 Identities = 184/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||||| |||| || || || | | Sbjct 31833064 TGAACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCGAGCTCCCCAGGGA 31833005 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||||||||| | ||| ||| |||||| || Sbjct 31833004 GGACGAGGCGGACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 31832945 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | ||||||||| | ||| |||| |||||||||| || ||||||| Sbjct 31832944 GGGCAAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 31832885 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 31832884 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 31832826 Score = 179 bits (198), Expect = 6e-39 Identities = 183/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||||| | || || |||||| | | Sbjct 9094696 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTCGCTAGCTCGCCGGGGA 9094637 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| |||| |||||||||||| | || | ||| ||| |||||| || Sbjct 9094636 GGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGATGGTGGGCTTCTTGTTGTAGC 9094577 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| || | ||||||| | ||| |||| |||||||||| || ||||||| Sbjct 9094576 GCGCGAGCTTGGCGGCCTCACCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 9094517 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | |||||||||||||||||| ||||||||| Sbjct 9094516 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTTG 9094458 Score = 98.7 bits (108), Expect = 2e-14 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Minus Query 1249571 GGCG-TCGCCTATCTGCACGCGCTCGACCCGCCCGTCGTCCACCGCGATCTCAAGAGCAG 1249629 |||| ||||||| || ||||| |||| ||||||||||| |||||||| |||||| || Sbjct 33849292 GGCGCTCGCCTACCTCCACGCCATCGAGCCGCCCGTCGTGCACCGCGACGTCAAGACCAC 33849233 Query 1249630 CAACCTGCTGGTCGACGACGAGTACAATGTCAAGGTGGCCGACTTTGGTCTCGCGCGCAT 1249689 |||| | || |||||| ||| | | | |||||||| |||||||| || ||| | ||| | Sbjct 33849232 CAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTCGGCCTCTCCCGCCT 33849173 Query 1249690 C 1249690 | Sbjct 33849172 C 33849172 >seq1 Length=42145699 Score = 183 bits (202), Expect = 5e-40 Identities = 184/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| ||||||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 36034581 TGAACTTGGTCACGGCCTTGGTGCCCTCCGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 36034522 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || |||||||| | ||||||||||||||||| | ||| ||| |||||| || Sbjct 36034521 GGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTAGC 36034462 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | ||||||| | | ||| |||| |||||||||| || ||||||| Sbjct 36034461 GGGCGAGCTTGGCGGCCTCCGCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 36034402 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | ||||||||||||||||||||| |||||| Sbjct 36034401 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTGAGGACCTTG 36034343 >seq2 Length=49199997 Score = 179 bits (198), Expect = 6e-39 Identities = 183/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 39011724 TGAACTTGGTGACAGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 39011665 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| |||| ||||||||||||||||| | ||| ||| |||||| || Sbjct 39011664 GAACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGTTTCTTGTTGTAGC 39011605 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || | |||||||| | ||| |||| |||||||||| || ||||||| Sbjct 39011604 GGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCGTTGATGAAGGAGTTCA 39011545 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||| ||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 39011544 TGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 39011486 Score = 91.5 bits (100), Expect = 2e-12 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || || |||||||| ||||||||| || || || || ||| ||||||| || || Sbjct 38628062 GCTGCAAACTACCTGGACATCAAGGGGCTGCTGGACCTGACCTGCCAGACCGTCGCGGAC 38628003 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||| ||| | || ||||| |||||||||||||| ||||||||| ||| Sbjct 38628002 ATGATCAAGGGGAAGACTCCGGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 38627948 Score = 89.7 bits (98), Expect = 8e-12 Identities = 114/155 (74%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 1433481 CAGGGCTTCCGCCCGACCAGCAGCGTCTCCTTTATGCGGGCCAGCAGATGGAAGACGGTC 1433540 |||| | ||||| ||||||||||| ||| ||| || || ||||| |||| ||||| | Sbjct 41013413 CAGGCATCCCGCCGGACCAGCAGCGGCTCATTTTCGCCGGGAAGCAGCTGGATGACGGCC 41013472 Query 1433541 GCCGGCTGGCCGACTATGCCATCCGCGCCGAGGCGTCAATGCATCTGGTGCTCAGGCTAC 1433600 || ||||||||||| ||||| ||| | | |||| ||||||||| | || | Sbjct 41013473 GCACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTGCACCTGGTGCTCCGCCTCC 41013532 Query 1433601 GCGGCGGCG---GGGGCGGACCCCCCGCCA-GCGC 1433631 ||||||||| |||||||| |||| ||| |||| Sbjct 41013533 GCGGCGGCGGCAGGGGCGGATACCCCACCATGCGC 41013567 >seq6 Length=36014550 Score = 178 bits (196), Expect = 2e-38 Identities = 186/241 (77%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 29647583 TGAACTTGGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCCCCGGGGA 29647642 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||||||||| | ||| ||| |||||| | Sbjct 29647643 GGACGAGGCGGACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 29647702 Query 1485590 GCGCCAG-GCGGCCGGCCTCGGTGCC-GATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 |||| || ||||| | || ||| | | | |||| |||||||||| |||||||| Sbjct 29647703 GCGCGAGCTTGGCCGCCTCCGCCGCCAGCTTC--TCGAAGATGTCGTTGATGAACGAGTT 29647760 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||||||| | |||||||||||||||||| |||||||| Sbjct 29647761 CATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACCTGCTTCAGCACCTT 29647820 Query 1485708 G 1485708 | Sbjct 29647821 G 29647821 Score = 178 bits (196), Expect = 2e-38 Identities = 186/241 (77%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||||||||||||||| |||||||| ||||||||| |||| || |||||| | | Sbjct 31611809 TGAACTTGGTGACGGCCTTGGTGCCCTCTGACACGGCGTGCTTGGCGAGCTCGCCGGGGA 31611750 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||||||||| | ||| ||| |||||| | Sbjct 31611749 GGACGAGGCGGACCGAGGTCTGGATCTCGCGGGAGGTGATGGTGGGCTTCTTGTTGTACC 31611690 Query 1485590 GCGCCAG-GCGGCCGGCCTCGGTGCC-GATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 |||| || ||||| | || ||| | | | |||| |||||||||| || ||||| Sbjct 31611689 GCGCGAGCTTGGCCGCCTCCGCCGCCAGCTTC--TCGAAGATGTCGTTGATGAAGGAGTT 31611632 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||||||| | ||||||||| ||||||||||||||||| Sbjct 31611631 CATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTT 31611572 Query 1485708 G 1485708 | Sbjct 31611571 G 31611571 >seq3 Length=50651951 Score = 168 bits (186), Expect = 1e-35 Identities = 183/240 (76%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||| |||||||||||||| ||||| |||||||||||| |||| || |||||| | | Sbjct 17551538 TGAACTTCGTGACGGCCTTGGTGCCCTCGGAGACGGCGTGCTTGGCGAGCTCGCCGGGGA 17551597 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || | ||||||||||||||| | ||| ||| |||||| | Sbjct 17551598 GGACGAGGCGGACCGAGGTCTGGATCTCGCGCGACGTGATGGTGGGCTTCTTGTTGTACC 17551657 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGG-TCGATCATGTCGTTGACAAACGAGTTC 1485648 || ||||| | ||||| ||| | || |||| ||||| |||| ||||||||| Sbjct 17551658 TGGCGAGGCGCGCCGCCTCC-TGCGCAAGCTTCTCGAAGATGTCATTGATGAACGAGTTC 17551716 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||||||||| | ||| ||||||||| | ||| |||||||||||||||||||||||| Sbjct 17551717 ATGATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCACCTGCTTGAGCACCTTG 17551776 Score = 100 bits (110), Expect = 5e-15 Identities = 115/150 (77%), Gaps = 10/150 (7%) Strand=Plus/Minus Query 1249559 TCGGCG--GCCACGGGCGTCGCCTATCTGCACGCGCTCG---ACCCGCCCGTCGTCCACC 1249613 |||||| |||| |||||||||||| ||||||| ||||| |||||||| ||||||||| Sbjct 6315628 TCGGCGCCGCCAAGGGCGTCGCCTACCTGCACGAGCTCGCCGACCCGCCCATCGTCCACC 6315569 Query 1249614 GCGATCTCAAGAGCAGCAACCTGCTGGTCGACGA-CGAGTACAATGTCAAGGTGGCCGAC 1249672 |||| ||||| ||||||| | || ||||||| || | ||| | ||| || ||||| Sbjct 6315568 GCGACATCAAGTCCAGCAACGTCCTCCTCGACGAGCGCCT-CAACGCCAAAGTCTCCGAC 6315510 Query 1249673 TTTGGTCTCGC---GCGCATCCGCGAGGAC 1249699 || || ||| | || | || |||||||| Sbjct 6315509 TTCGGCCTCTCCAAGCCCCTCGGCGAGGAC 6315480 >seq9 Length=58970307 Score = 147 bits (162), Expect = 3e-29 Identities = 178/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || |||||||||| ||||||| ||||| ||||||| ||| |||| || || ||| | | Sbjct 49818513 TGAACTTGGTGACAGCCTTGGCGCCCTCGAAGACGGCATGCTTGGCGAGCTCCCCGTGGA 49818572 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| |||| |||||||||||| |||| | ||| ||| |||||| || Sbjct 49818573 GGACAAGGCGTACGGAGGTCTGGATCTCCCGGGAGGTGATAGTGGGCTTCTTGTTGTAGC 49818632 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGG-TCGATCATGTCGTTGACAAACGAGTTC 1485648 | | ||||| |||| || ||| || |||| ||||||||| || |||||| Sbjct 49818633 GGGTGAGGCGCGCGGCTTCC-TGCACCAGCTTCTCGAAGATGTCGTTGGTGAATGAGTTC 49818691 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 ||||| ||||| | ||| ||||||||| | ||| |||||||||||||| ||||||||| Sbjct 49818692 ATGATGGACATGGCCTTGGAGGAGATGCCGATGTCTGGGTGCACCTGCTTCAGCACCTTG 49818751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916210551772943