Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq337 581 4e-161 seq14 581 4e-161 seq4 425 7e-114 seq7 269 3e-67 seq1 136 5e-27 >seq337 Length=135516 Score = 581 bits (644), Expect = 4e-161 Identities = 724/988 (73%), Gaps = 3/988 (0%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCC 177677 ||||| || || | ||| | |||||| | || || |||||||| |||||||||| Sbjct 1566 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 1507 Query 177678 CCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAAC 177737 || || || || || || || ||||| || || ||||||| | | ||||| ||||| Sbjct 1506 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 1447 Query 177738 ATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 177797 || || |||||||| || | || |||| || || || | || || || || || Sbjct 1446 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 1387 Query 177798 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 177857 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 1386 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 1327 Query 177858 TTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGT 177917 | |||||| | | || | | |||||||| ||||||||||||||| | |||| Sbjct 1326 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 1267 Query 177918 CTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCA 177977 || ||||||||||| ||||| ||||||||| || || ||||||||||| || | || Sbjct 1266 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 1207 Query 177978 GTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036 || ||||| | | |||||| | |||||||| ||||| |||| ||||||| | || || Sbjct 1206 GT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 1148 Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCC 178096 ||||||||||| |||| ||| |||||||||| || || ||||| ||||||||||| || Sbjct 1147 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 1088 Query 178097 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 1087 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 1028 Query 178157 AAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGG 178216 | || || ||| | || | || || || |||| |||||| || | || Sbjct 1027 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 968 Query 178217 TTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGG 178276 |||||| || || ||||||||||| || |||||||| || || || || ||||| || || Sbjct 967 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 908 Query 178277 TCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGC 178336 ||| || |||||||||||||| ||||||||||| ||||| | ||||||||| | || Sbjct 907 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 848 Query 178337 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAA 178396 || ||||||||||| || ||||||||||| || | ||| | || |||||||| || Sbjct 847 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 788 Query 178397 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178456 ||| ||||||||||| |||||||| || | | || | ||||| || || | || || Sbjct 787 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 728 Query 178457 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAG 178516 ||||| || | |||||||||| ||| || |||||||| ||||||||| | ||| | Sbjct 727 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT-G 669 Query 178517 CACATAACTTCCCGCTTGATCTTGCAGC 178544 | || |||||||| || || || || || Sbjct 668 CTCACAACTTCCCTCTAGACCTAGCTGC 641 Score = 531 bits (588), Expect = 6e-146 Identities = 724/1005 (72%), Gaps = 4/1005 (0%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 |||| |||||| | |||| || || || ||||| || ||||| || || | || Sbjct 9000 TGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCT 9059 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||||||| | || | || |||||| |||| ||||| ||||||| || || Sbjct 9060 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTT 9119 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 179127 |||| |||||||| | |||||||||||| | |||||| || ||||||| | || || Sbjct 9120 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCGGCG 9178 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || || || ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 9179 GTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 9238 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 |||||| |||| || ||||| ||| | || || || |||| ||| || |||||||| Sbjct 9239 CAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCAT 9298 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306 || || || || ||||| || |||||| | ||||| |||||||| || || ||| || Sbjct 9299 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAA 9358 Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366 | | || ||||| ||||| ||| | || ||||||| || || || || ||| ||||| Sbjct 9359 T-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATT 9417 Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426 || || || ||||| |||||||| |||||||||||||||| ||||| || || || Sbjct 9418 CCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 9477 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 || ||| |||| | |||||||| ||||| || || || ||||| | ||||| ||||| Sbjct 9478 TATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 9537 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| || | | || | |||||||| | ||||| ||||| | || Sbjct 9538 TATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTAC 9597 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 ||||| || || | | |||||||| || ||||| || || || || || | Sbjct 9598 CGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCC 9657 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 9658 AACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTT 9717 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 || ||| | ||| |||||| |||||||| || ||||||| ||| ||||| || |||| Sbjct 9718 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCAC 9777 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | |||||||| | |||| || ||||| || || ||||| ||||| Sbjct 9778 CGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGA 9837 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 || || || || ||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 9838 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 9897 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || |||||| | || || || | ||||| ||| ||||| || ||||| || ||||| Sbjct 9898 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 9957 Query 179907 AAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 9958 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 10002 >seq14 Length=147140 Score = 581 bits (644), Expect = 4e-161 Identities = 724/988 (73%), Gaps = 3/988 (0%) Strand=Plus/Minus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCC 177677 ||||| || || | ||| | |||||| | || || |||||||| |||||||||| Sbjct 81911 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCCT 81852 Query 177678 CCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAAC 177737 || || || || || || || ||||| || || ||||||| | | ||||| ||||| Sbjct 81851 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAAT 81792 Query 177738 ATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 177797 || || |||||||| || | || |||| || || || | || || || || || Sbjct 81791 ATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAATT 81732 Query 177798 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 177857 |||||||| ||||| ||||||| ||| | || || || ||||||| | || | || Sbjct 81731 TGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 81672 Query 177858 TTTCACTTCCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGT 177917 | |||||| | | || | | |||||||| ||||||||||||||| | |||| Sbjct 81671 CTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 81612 Query 177918 CTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCA 177977 || ||||||||||| ||||| ||||||||| || || ||||||||||| || | || Sbjct 81611 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 81552 Query 177978 GTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTAT 178036 || ||||| | | |||||| | |||||||| ||||| |||| ||||||| | || || Sbjct 81551 GT-TTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 81493 Query 178037 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCC 178096 ||||||||||| |||| ||| |||||||||| || || ||||| ||||||||||| || Sbjct 81492 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 81433 Query 178097 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 || |||||| | ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 81432 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 81373 Query 178157 AAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGG 178216 | || || ||| | || | || || || |||| |||||| || | || Sbjct 81372 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 81313 Query 178217 TTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGG 178276 |||||| || || ||||||||||| || |||||||| || || || || ||||| || || Sbjct 81312 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 81253 Query 178277 TCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGC 178336 ||| || |||||||||||||| ||||||||||| ||||| | ||||||||| | || Sbjct 81252 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 81193 Query 178337 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAA 178396 || ||||||||||| || ||||||||||| || | ||| | || |||||||| || Sbjct 81192 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 81133 Query 178397 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178456 ||| ||||||||||| |||||||| || | | || | ||||| || || | || || Sbjct 81132 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 81073 Query 178457 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAG 178516 ||||| || | |||||||||| ||| || |||||||| ||||||||| | ||| | Sbjct 81072 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT-G 81014 Query 178517 CACATAACTTCCCGCTTGATCTTGCAGC 178544 | || |||||||| || || || || || Sbjct 81013 CTCACAACTTCCCTCTAGACCTAGCTGC 80986 Score = 524 bits (580), Expect = 9e-144 Identities = 724/1005 (72%), Gaps = 6/1005 (1%) Strand=Plus/Plus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 |||| |||||| | |||| || || || ||||| || ||||| || || | || Sbjct 89671 TGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCT 89730 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||||||| | || | || |||||| |||| ||||| ||||||| || || Sbjct 89731 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTT 89790 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 179127 |||| |||||||| | |||||||||||| | |||||| || ||||||| | || || Sbjct 89791 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGCGGCG 89849 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || || || ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 89850 GTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 89909 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 |||||| |||| || ||||| ||| | || || || |||| ||| || |||||||| Sbjct 89910 CAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCAT 89969 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306 || || || || ||||| || |||||| | ||||| |||||||| || || ||| || Sbjct 89970 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAA 90029 Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366 | | || ||||| ||||| ||| | || ||||||| || || || || ||| ||||| Sbjct 90030 T-TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATT 90088 Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426 || || || ||||| |||||||| |||||||||||||||| ||||| || || || Sbjct 90089 CCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 90148 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 || || |||| | |||||||| ||||| || || || ||||| | ||||| ||||| Sbjct 90149 TATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 90207 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| || | | || | |||||||| | ||||| ||||| | || Sbjct 90208 TATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTAC 90267 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 ||||| || || | | |||||||| || ||||| || || || || || | Sbjct 90268 CGTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCC 90327 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || ||||| |||||||| || ||||| Sbjct 90328 AACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTT 90387 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 || ||| | ||| |||||| |||||||| || ||||||| ||| ||||| || |||| Sbjct 90388 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCAC 90447 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | |||||||| | |||| || ||||| || || ||||| ||||| Sbjct 90448 CGGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGA 90507 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 || || || || ||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 90508 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 90567 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || |||||| | || || || | ||||| ||| ||||| || | ||||| || ||||| Sbjct 90568 AAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCT-CAGATCAGCCTCATGA 90626 Query 179907 AAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || ||||| |||| ||||| || Sbjct 90627 AAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 90671 >seq4 Length=40407879 Score = 425 bits (470), Expect = 7e-114 Identities = 607/846 (72%), Gaps = 8/846 (1%) Strand=Plus/Plus Query 179110 AACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCT 179168 || ||||||| | || || || || || ||||| || | | | || ||| | | || Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCT 27920002 Query 179169 ACTTTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATG 179228 ||| ||||| || || | |||||| |||| || ||||| ||| | || || || || Sbjct 27920003 ACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTG 27920062 Query 179229 GAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGA 179288 || ||| || |||||||| || || || || ||||| | |||||| | ||||| ||||| Sbjct 27920063 GACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGA 27920121 Query 179289 ACTGGCACG-TCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTG 179347 ||| || || ||| || | | || ||||| ||||| ||| | || || |||| || | Sbjct 27920122 ACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCG 27920180 Query 179348 CCGTATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGC 179407 | || || ||| ||||| || || || ||||| |||||||| ||||||||||||||| Sbjct 27920181 CAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGC 27920240 Query 179408 CATCGTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACT 179467 | ||||| || || || || ||| |||| | |||||||| ||||| || || || | Sbjct 27920241 CGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATT 27920300 Query 179468 GGACACTCAACCCCTTTCACATGATGGGAGTTG-CAG-GTATCCTGGGTGGTGCTCTGCT 179525 |||| | ||||| ||||| ||||||||||||| ||| |||| | |||| |||||||| Sbjct 27920301 GGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTAT--TAGGTGTAGCTCTGCT 27920358 Query 179526 CTCTGCTATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAA 179585 | ||||| ||||| | |||||||| || || | | ||||||||| || ||||| Sbjct 27920359 ATGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAA 27920418 Query 179586 CACATTTAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAA 179645 || ||| || || || | || ||||| || || || ||||| ||||| | || || Sbjct 27920419 TACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAA 27920478 Query 179646 CCGTTTTTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTT 179705 ||| |||||||| || ||||| || ||| | ||| |||||| | |||||| || ||||| Sbjct 27920479 CCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTT 27920538 Query 179706 TAAGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGC 179765 || ||| ||||| || |||| || | ||| | | |||||||| | |||| | || Sbjct 27920539 TATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGC 27920598 Query 179766 TCTTAATCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGA 179825 ||| || || | ||| ||||| || | || || ||| | ||||| ||||||||||| Sbjct 27920599 TCTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGA 27920658 Query 179826 GTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGC 179885 || ||||| ||||| || || || |||||| | || | || | |||| ||| |||| Sbjct 27920659 ATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGC 27920718 Query 179886 ACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAA 179945 | || ||||| || |||||||| | || ||||| || || || ||||| |||| || Sbjct 27920719 AGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAAA 27920778 Query 179946 CGCACT 179951 ||| || Sbjct 27920779 CGCTCT 27920784 >seq7 Length=35964315 Score = 269 bits (298), Expect = 3e-67 Identities = 336/459 (73%), Gaps = 1/459 (0%) Strand=Plus/Plus Query 178083 ATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTC 178142 ||| ||||||| || || |||||| | ||||| ||||| |||||||| || || || ||| Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 178143 TCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAG 178202 |||||||||||| | || || | | | || | || || || |||| |||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAG 24459376 Query 178203 TCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCC 178262 || || | |||||||| || || |||||||||| | |||||||| || || || Sbjct 24459377 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCT 24459436 Query 178263 CATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTG 178322 |||||||| || ||||| || |||||||||||||| ||||||||||| |||| | Sbjct 24459437 CATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTA 24459496 Query 178323 CACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCC 178382 ||||||||| | || || ||||||||||| || ||||||||||| || | ||| | Sbjct 24459497 CACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 24459556 Query 178383 ACCATGGCATTTAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGA 178442 || |||||||| ||||| ||||| ||||| |||||||| || | | || | ||||| Sbjct 24459557 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 24459616 Query 178443 CGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATG 178502 || || | || || ||||| || | ||||||||| ||| || |||||||| ||| Sbjct 24459617 CGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATG 24459676 Query 178503 CACGAAAGAAATAGCACATAACTTCCCGCTTGATCTTGC 178541 |||||| | ||| || || |||||||| || || || || Sbjct 24459677 CACGAACGTAAT-GCTCACAACTTCCCTCTAGACCTAGC 24459714 >seq1 Length=42145699 Score = 136 bits (150), Expect = 5e-27 Identities = 185/257 (72%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 179608 ACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTC 179667 || |||| || || || ||||| ||||| | || ||||| || ||||| || || || Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 179668 GGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATG 179727 || ||| | ||| |||||| ||||||| || ||||||| ||| ||||| || |||| Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 27067252 Query 179728 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGAT 179787 | | | ||| | || |||||||| | | || || ||||| || || ||||| ||||| Sbjct 27067253 GAT-TATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 179788 TTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAG 179847 || | || || ||| | ||||| ||||||||||| || |||| ||||| || || Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 179848 AACATTCTTCTGAATGA 179864 || |||||| | || || Sbjct 27067372 AATATTCTTTTAAACGA 27067388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605664648626920