Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq4 381 8e-100 seq7 324 2e-82 seq5 167 3e-35 seq3 152 7e-31 seq2 149 9e-30 seq1 149 9e-30 seq6 143 4e-28 seq9 122 1e-21 >seq4 Length=40407879 Score = 381 bits (422), Expect = 8e-100 Identities = 448/598 (75%), Gaps = 12/598 (2%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 |||||||||||| || | || ||||||| | ||||||| ||||| | || || | Sbjct 10866701 GAGCCGCTGCTGGCGGAGTCCTCGGACCGCTTCTCCATGTTCCCGATCCGGTTCCCGCAG 10866642 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||||| | ||| || ||||| | ||| ||||| ||||| ||||||||||| ||||| Sbjct 10866641 ATCTGGGAGTTCTAC-AAGAAGGCGGTGGCGTCCTTCTGGACGGCCGAGGAGGTGGACCT 10866583 Query 1455836 CGGCGCCGACACGGTCCACTGGGT---GTCGCTGAGCGACGACGAGCGCCATTTCATCAA 1455892 | ||||||| || |||||||| | |||| | |||||||||||| |||||| Sbjct 10866582 CTCCGCCGACGCGCGCCACTGGGACGAGGCGCTCTCCCCCGACGAGCGCCACTTCATCTC 10866523 Query 1455893 GCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCC 1455952 ||||| |||||||| || ||||||| ||| ||||||||| ||||||||| || || Sbjct 10866522 CCACGTGCTCGCCTTCTT-CGCCGCCTCCGACGGCATCGTGCTCGAGAACCTCGCGTCCC 10866464 Query 1455953 GCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCA 1456012 |||| ||| || || || | | ||||| || || ||||| ||||||||||||| Sbjct 10866463 GCTTCATGTCCGACGTGCAGGTCGCCGAGGCCCGCGCCTTCTACGGCTTCCAGATCGCCA 10866404 Query 1456013 TCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGG 1456072 |||| ||||||||||| || | |||||||| ||| |||| |||||| || ||| | Sbjct 10866403 TCGAGAACATCCACTCGGAGATGTACTCGCTGCTGCTCGAGACCTACATCCGCGACGGCG 10866344 Query 1456073 TCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCG 1456132 ||||||||||| |||||| |||||||||||||| || || | || | ||||||| Sbjct 10866343 CCGAGAAGGACCGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTACGCCGCAAGGCCG 10866284 Query 1456133 ACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGG 1456192 ||||||| ||| ||||| || || ||| || ||| |||||||| ||||||| Sbjct 10866283 ACTGGGCCATGCGCTGGATTGAC--GGCGGGGAGCG---CTTCGCCGAGCGACTCGTCGC 10866229 Query 1456193 CTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAA 1456251 || ||| |||||||||| ||||| ||||||||| |||||||||||||| |||||||| Sbjct 10866228 GTTCGCCTGCGTCGAGGGAATCTTCTTCTCGGGCTCCTTCTGCGCCATCTTCTGGCTCAA 10866169 Query 1456252 GAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||| || |||||| |||| | || ||| |||||| | ||| |||||||| Sbjct 10866168 GAAGCGGGGGCTCATG-CCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGA 10866112 Score = 199 bits (220), Expect = 6e-45 Identities = 244/325 (75%), Gaps = 6/325 (2%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACCGAC 1456510 ||||||| ||||| || || || |||||| | ||| || ||||| || ||| | | Sbjct 10866106 TGCACTGCGACTTCGCGTGCCTCCTCTACGACCTCCTCCGCAGCAAGCTCGACGAGCCCC 10866047 Query 1456511 GTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCG 1456570 | | || | ||||| ||| ||| |||||||| |||||| |||||||||| |||| || Sbjct 10866046 GCGTCCGCG-AGATCGTCGCCGACGCCGTCGACATCGAGCGAGAGTTTGTCTGCGACGCG 10865988 Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || || |||||| |||||||||||| | |||| ||| |||||||||| | | || | Sbjct 10865987 CTCCCCGTCGCGCTCGTCGGCATGAACGGC-GCGCTAATGAGCCAGTACATCG-AGTTCG 10865930 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCG 1456690 |||| |||||||||||| ||| ||||| ||| ||||| ||| | |||||||| Sbjct 10865929 TCGCAGACCGCCTGCTCATGGCTCTCGGGTGC-AAGAAGATGTACAACGCCGCCAACCCC 10865871 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 || ||||||||| | |||||||| |||||||||| ||||| |||||| ||||| Sbjct 10865870 TTTGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACAAACTTCTTCGAGAAGCGCGTC 10865811 Query 1456750 GGCGAGTACGCCAAGGCCGGCGTCA 1456774 ||||| ||| |||||| ||||| Sbjct 10865810 GGCGACTACCAGAAGGCCTCCGTCA 10865786 >seq7 Length=35964315 Score = 324 bits (358), Expect = 2e-82 Identities = 338/438 (77%), Gaps = 8/438 (2%) Strand=Plus/Minus Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 ||||||||||| |||||| ||||| |||||||| || ||||||| ||| |||||||| Sbjct 23912200 GACGAGCGCCACTTCATCTCCCACGTGCTCGCCTTCTT-CGCCGCCTCCGACGGCATCGT 23912142 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992 | ||||||||| || |||||| ||| || ||||| | | ||||| || || Sbjct 23912141 GCTCGAGAACCTCTCCTCCCGCTTCATGTCCGACGTCCAGGTCGCCGAGGCGCGCGCCTT 23912082 Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052 ||||| ||||||||||||||||| ||||||||||| || | |||||||| || |||| Sbjct 23912081 CTACGGCTTCCAGATCGCCATCGAGAACATCCACTCGGAGATGTACTCGCTGCTTCTCGA 23912022 Query 1456053 CACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC 1456112 |||||| || ||| | |||||||||||||||||| |||||||||||||| || || Sbjct 23912021 GACCTACATCCGCGACGGCGCCGAGAAGGACCACCTCTTCCGCGCCATCGACACCGTCCC 23911962 Query 1456113 GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC 1456172 | ||| | |||||||||||||| ||| |||||| || || ||| || | Sbjct 23911961 CGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGAC--GGCGGGGAGCG---C 23911907 Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 || |||||||| ||||||| ||| ||| |||| ||||||||||| ||||||||| ||| Sbjct 23911906 TTCGCCGAGCGCCTCGTCGCCTTCGCCTGCGTTGAGGGCATCTTCTTCTCGGGCTCCTTC 23911847 Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGA 1456291 ||||||||||| |||||||||||||||||||||||| |||| | || ||| |||||| Sbjct 23911846 TGCGCCATCTTCTGGCTCAAGAAGCGCGGCCTCATG-CCGGGCCTCACCTTCTCCAACGA 23911788 Query 1456292 ATTTATCAGTCGCGACGA 1456309 | ||| |||||||| Sbjct 23911787 GCTCATCTCCCGCGACGA 23911770 Score = 185 bits (204), Expect = 1e-40 Identities = 237/317 (75%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 1456454 CACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGC-CGTCGACCGACGT 1456512 ||||| ||||| ||||| || |||||| | ||| || ||||| || ||| | || Sbjct 23911762 CACTGCGACTTCGCCTGCCTCCTCTACGACCTCCTCCGCAGCAAGCTCGACGAGGGCCGC 23911703 Query 1456513 GCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCT 1456572 | || | ||||| ||| ||| |||||||| |||||| ||||| ||| |||| |||| Sbjct 23911702 GTCCGCG-AGATCGTCGCCGACGCCGTCGACATCGAGCGCGAGTTCGTCTGCGACGCGCT 23911644 Query 1456573 GCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTC 1456632 || || |||||| |||| ||||||| | ||||||| |||||||||| || || ||| Sbjct 23911643 CCCCGTCGCGCTCGTCGGAATGAACGGCGG-GCTCATGAGCCAGTACATCGAGTTC-GTC 23911586 Query 1456633 GCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACCCG 1456690 ||||||||||||||| |||||| || | ||||| ||| ||| |||||||| Sbjct 23911585 GCCGACCGCCTGCTCATGGCGCTGGGGCACC-AGAAGATGTACA--ACGTCGCCAACCCA 23911529 Query 1456691 TTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT- 1456749 ||| ||||||||| | |||||||| |||||||||||||||| |||||| ||||| Sbjct 23911528 TTCGACTGGATGGAGCTCATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTC 23911469 Query 1456750 GGCGAGTACGCCAAGGC 1456766 || |||||| ||||| Sbjct 23911468 GGGGAGTACCAGAAGGC 23911452 >seq5 Length=47252588 Score = 167 bits (184), Expect = 3e-35 Identities = 178/232 (77%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||||||||| || | |||| |||||||| | || Sbjct 41016734 ATCTTCAAGGTGCTCAAGCAGGTGCACCCG-GA--CATTGGTATCTCCTCCAA---GGCC 41016681 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||||||||| |||||||||| |||| ||| | ||||||| Sbjct 41016680 ATGTCCATCATGAACTCGTTCATCAACGACATCTTCGAGAAGCTCGCCCAGGAGGCCGCC 41016621 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||||| ||||||| ||||||| ||| ||| | | || |||||||||||| | ||| Sbjct 41016620 CGCCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCGGTG 41016561 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| |||||||||||| |||||||||| Sbjct 41016560 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 41016509 Score = 154 bits (170), Expect = 2e-31 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||| ||||||||||||||| || | | || |||| ||| |||| || Sbjct 9080136 ATCTTCAAGGTGCTGAAGCAGGTGCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 9080083 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | ||||||| Sbjct 9080082 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGTGAGGCCGCC 9080023 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| ||||||| ||| ||| | | || |||||||||||| |||| Sbjct 9080022 AAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCCGGGAGATCCAGACCTCCGTC 9079963 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 9079962 CGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 9079911 Score = 145 bits (160), Expect = 1e-28 Identities = 174/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||| ||||||||||||||| || | | || |||| ||| |||| || Sbjct 9094453 ATCTTCAAGGTGCTGAAGCAGGTGCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 9094506 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | ||||||| Sbjct 9094507 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGTGAGGCCGCC 9094566 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||||| ||||||| ||| ||| | | | |||||||||||| |||| Sbjct 9094567 AAGCTCGCGCGCTACAACAAGAAGCCCACCATCACCTCCAGGGAGATCCAGACCTCCGTC 9094626 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || || | ||||||||||||||||||||||| Sbjct 9094627 CGCCTCGTCCTCCCCGGCGAGCTAGCGAAGCACGCCGTCTCCGAGGGCACCA 9094678 Score = 145 bits (160), Expect = 1e-28 Identities = 174/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||||||||| || | | || |||| ||| |||| || Sbjct 31832821 ATCTTCAAGGTGCTCAAGCAGGTGCACCCG-GA--CATCGG--CATC-TCCTCCAAGGCC 31832874 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | ||||||||| Sbjct 31832875 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCCGAGGCCGCC 31832934 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||||||| | || Sbjct 31832935 AAGCTTGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCGGTC 31832994 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | || || || |||| |||||||||||| |||||||||| Sbjct 31832995 CGCCTCGTCCTCCCTGGGGAGCTCGCCAAGCACGCCGTCTCTGAGGGCACCA 31833046 >seq3 Length=50651951 Score = 152 bits (168), Expect = 7e-31 Identities = 178/233 (76%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||||||||| || | | || |||| ||| |||| || Sbjct 17551781 ATCTTCAAGGTGCTCAAGCAGGTGCACCCG-GA--CATCGG--CATC-TCCTCCAAGGCC 17551728 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACC-GCATCGGCACCGAGGCCGG 725029 |||||||||||||||||||| |||| ||||| |||| || | ||| ||||| | Sbjct 17551727 ATGTCGATCATGAACTCGTTCATCAATGACATCTTCGAGAAGCTTGCGCAG-GAGGCGGC 17551669 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||| || | | ||||||| ||| ||| ||||||||||||||||| | || Sbjct 17551668 GCGCCTCGCCAGGTACAACAAGAAGCCCACCATCACGTCGCGCGAGATCCAGACCTCGGT 17551609 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | |||||| || |||| ||||||||||||||||||||||| Sbjct 17551608 CCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 17551556 >seq2 Length=49199997 Score = 149 bits (164), Expect = 9e-30 Identities = 175/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||||||||| || | | || |||| ||| |||| || Sbjct 39011481 ATCTTCAAGGTGCTCAAGCAGGTGCACCCG-GA--CATCGG--CATC-TCCTCCAAGGCC 39011534 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | |||||||| Sbjct 39011535 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGGCGAGGCCGCC 39011594 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||||||| |||| Sbjct 39011595 AAGCTCGCCCGCTACAACAAGAAACCCACCATCACCTCCCGCGAGATCCAGACCTCCGTC 39011654 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| | | | ||| || || |||| ||||||||||||||||||||||| Sbjct 39011655 CGCCTCGTTCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 39011706 Score = 89.7 bits (98), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 837190 CGCCGCAGAGTCTCAGAATGAGATGGATTGTCGACTCTTTTTGGATGCCGTAAAAAGAGA 837249 |||||| ||| | ||| | || || | |||||||| || |||||| |||| | || Sbjct 39557181 CGCCGCGGAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGA 39557240 Query 837250 GCGAGAGTCGGTCGTCTAAAGGTCGGCCGGCAAATGTCATCTTCTGTTGGTCCGCGGGGA 837309 | | | | | ||| || | | ||||| || | | ||| ||||||| |||| Sbjct 39557241 GGGTGCGGCCGTCCTCGAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGA 39557300 Query 837310 TACCCTCCTTGTCATAGA-CAAGCCACTTGATCTCGAGTATGGTGTCGCCGTGCCGCGCC 837368 ||||||||||||| | || | | | ||||| | | |||||||||| | | | || Sbjct 39557301 TACCCTCCTTGTCCTGGATCTTGGC-CTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 39557359 Query 837369 TCGATCGTGATCGTCTTGCCCGTCAGCGTCTTTAAAAAGAGCGTCATCTTG 837419 |||| ||||||||||| |||||||||||||| | |||| | ||||||| Sbjct 39557360 TCGAGGGTGATCGTCTTCCCCGTCAGCGTCTTCACGAAGATCTGCATCTTG 39557410 Score = 89.7 bits (98), Expect = 7e-12 Identities = 109/148 (74%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 799171 GTGGGGGGTCCACCCC---CGCCGCCGCGCAGCCTGAGCACCAGGTGCATCGTCGCATCG 799227 |||||| ||| |||| |||||||||| || | |||||||||||||| ||| | || Sbjct 41013560 GTGGGGTATCCGCCCCTGCCGCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTGGACTCC 41013501 Query 799228 GCGCGGATGGCATAGTCGACCAGGCGGCGACTGTCTTCCAACTGTTGGCCCGCATAAATG 799287 ||||| |||||| ||||| ||| | ||| |||| ||| | || || ||||| Sbjct 41013500 TTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCATCCAGCTGCTTCCCGGCGAAAATG 41013441 Query 799288 AGGCGCTGCTGGTCGGGTGGTATTCCTG 799315 || ||||||||||| || || || |||| Sbjct 41013440 AGCCGCTGCTGGTCCGGCGGGATGCCTG 41013413 >seq1 Length=42145699 Score = 149 bits (164), Expect = 9e-30 Identities = 175/232 (75%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||| |||||||||||||||||| || | | || |||| ||| |||| || Sbjct 36034338 ATCTTCAAGGTCCTCAAGCAGGTGCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 36034391 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || |||||||||| |||| ||| | | ||||||| Sbjct 36034392 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGAAGCTCGCCGCGGAGGCCGCC 36034451 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || |||| ||||||| ||| ||| | | ||||||||||||||| | ||| Sbjct 36034452 AAGCTCGCCCGCTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCGGTG 36034511 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | ||| || || |||| |||||||||||| |||||||||| Sbjct 36034512 CGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCGGAGGGCACCA 36034563 >seq6 Length=36014550 Score = 143 bits (158), Expect = 4e-28 Identities = 177/234 (76%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||| ||||||||||||||| || | | || |||| ||| |||| || Sbjct 29647826 ATCTTCAAGGTGCTGAAGCAGGTGCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 29647773 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC-GGCACCGAGGCCGG 725029 ||||| |||||||||||||| |||||||||| |||| | | | ||| || | ||| Sbjct 29647772 ATGTCCATCATGAACTCGTTCATCAACGACATCTTCGA--GAAGCTGGCGGCGGAGGCGG 29647715 Query 725030 TCGC-CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 | || ||||| | ||||||| ||| ||| | | ||||||||||||||| | | Sbjct 29647714 CCAAGCTCGCGCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCGG 29647655 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||||| || | | ||| || || |||| ||||||||||||||||||||||| Sbjct 29647654 TCCGCCTCGTCCTCCCCGGGGAGCTCGCCAAGCACGCCGTCTCCGAGGGCACCA 29647601 Score = 134 bits (148), Expect = 2e-25 Identities = 175/234 (75%), Gaps = 10/234 (4%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| |||||||||||||||||| |||||| || | | || |||| ||| |||| || Sbjct 31611566 ATCTTCAAGGTGCTCAAGCAGGTCCACCCC-GA--CATCGG--CATC-TCCTCCAAGGCC 31611619 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC-GGCACCGAGGCCGG 725029 ||||| ||||||||||| || |||||||||| |||| | | | ||| || | ||| Sbjct 31611620 ATGTCCATCATGAACTCCTTCATCAACGACATCTTCGA--GAAGCTGGCGGCGGAGGCGG 31611677 Query 725030 TCGC-CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 | || ||||| | ||||||| ||| ||| | | ||||||||||||||| | | Sbjct 31611678 CCAAGCTCGCGCGGTACAACAAGAAGCCCACCATCACCTCCCGCGAGATCCAGACCTCGG 31611737 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||||| || | | |||||| || |||| ||||||||| || |||||||||| Sbjct 31611738 TCCGCCTCGTCCTCCCCGGCGAGCTCGCCAAGCACGCCGTGTCAGAGGGCACCA 31611791 >seq9 Length=58970307 Score = 122 bits (134), Expect = 1e-21 Identities = 171/233 (73%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||||| |||||||||||||| || | | || |||| ||| |||| || Sbjct 49818756 ATCTTCAAGGTGCTGAAGCAGGTGCACCCA-GA--CATCGG--CATC-TCCTCCAAGGCC 49818703 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCG-GCACCGAGGCCGG 725029 ||||| ||||||||||| || ||||||||| |||| | | ||| || |||| Sbjct 49818702 ATGTCCATCATGAACTCATTCACCAACGACATCTTCGAGAAGCTGGTGCAG-GAAGCCGC 49818644 Query 725030 TCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||| | |||| ||||||| ||| ||| | | || |||||||||||| |||| Sbjct 49818643 GCGCCTCACCCGCTACAACAAGAAGCCCACTATCACCTCCCGGGAGATCCAGACCTCCGT 49818584 Query 725090 GCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || | | ||| || || |||| ||| ||||||| ||||||| ||| Sbjct 49818583 ACGCCTTGTCCTCCACGGGGAGCTCGCCAAGCATGCCGTCTTCGAGGGCGCCA 49818531 Score = 87.8 bits (96), Expect = 3e-11 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 1154857 CCCGGAACTTGGTCAGGCCAAAGTCTGACACCTTGACATTCCACTTGTTGTCGAGCAGCA 1154916 || ||| ||||| || ||| ||||| ||||||||| |||||||| ||||| ||||| | Sbjct 51987266 CCAGGACCTTGGCCATGCCGAAGTCCGACACCTTGGGGTTCCACTTCTTGTCCAGCAGGA 51987325 Query 1154917 GGTTGAGCGACTTGACGTCGCGGTGCAC 1154944 |||| |||||||| |||||||||||| Sbjct 51987326 TGTTGCTCGACTTGATGTCGCGGTGCAC 51987353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177778695730594