Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq337 690 0.0 seq14 690 0.0 seq4 408 5e-109 seq7 387 2e-102 seq8 87.8 2e-12 >seq337 Length=135516 Score = 690 bits (764), Expect = 0.0 Identities = 748/989 (76%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 ||||||| | ||||| || ||||| | ||||| || || | || ||||| || | Sbjct 1627 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 1568 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGCTTCATCGTTGCCTTCGTCGCTGCTCC 183314 |||||| || || | ||| | ||||| | || || | |||||| |||||||||| Sbjct 1567 GATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 1508 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||| || || || || || || || || || ||| |||| || | | ||||||||||| Sbjct 1507 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 1448 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 || || |||||||| || ||||| |||| || || ||| | || || || || || Sbjct 1447 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 1388 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494 |||||||| ||||| | ||||| ||| | || || || |||||||| | || | || Sbjct 1387 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1328 Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554 | |||||| | |||| || || || |||||||||||||||||| | || ||| Sbjct 1327 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1268 Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614 ||| |||||||| |||||||| |||||| ||| || |||||||| ||||| || || Sbjct 1267 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1208 Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTAT 183674 ||| ||| || | |||||| | |||||||| ||| |||||||||||| | || || Sbjct 1207 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 1148 Query 183675 CAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 183734 ||| || || |||| |||| |||| ||||| || |||||||||||||| ||||| || Sbjct 1147 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 1088 Query 183735 CTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGG 183794 || |||||| | ||||| |||||||| ||||| ||||| || |||||||| ||||| || Sbjct 1087 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 1028 Query 183795 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATG 183853 ||| |||| || || | | | | || | ||||||||||| |||||| || | | Sbjct 1027 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGG 969 Query 183854 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTG 183913 ||||||| || ||||||||||||||||| || |||||||| |||||||| || || |||| Sbjct 968 GTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTG 909 Query 183914 GTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTG 183973 |||| | |||||||| |||||| || ||||| ||||||||| | ||||||||| | | Sbjct 908 GTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 849 Query 183974 CTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTA 184033 |||||||||| || || || |||||||| |||||| | ||| |||| ||||||||||| | Sbjct 848 CTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCA 789 Query 184034 ACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACA 184093 |||| ||||| || || |||||||| || | ||||| |||||||||| || | || | Sbjct 788 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 729 Query 184094 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATG 184153 | ||||| || | ||||||||||| |||||| |||||||| |||||||| ||||||| Sbjct 728 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 669 Query 184154 CTCACAACTTCCCTCTCGACCTTGCTGCT 184182 |||||||||||||||| ||||| |||||| Sbjct 668 CTCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 509 bits (564), Expect = 2e-139 Identities = 717/1004 (71%), Gaps = 2/1004 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 |||| |||||| | | | ||||| || || ||||| || ||||| || || | || | Sbjct 9000 TGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCT 9059 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||||||| | || | || || ||| |||| || || || ||||| || | Sbjct 9060 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTT 9119 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 |||||||||| || ||||| ||| || | || ||| ||||| | || || || | Sbjct 9120 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGCGGCGG 9179 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 | || |||||||| | | | | || ||| | | ||||| ||||| || || | | Sbjct 9180 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 9239 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 | || ||| | | || |||| ||| | || || || |||| |||||| || ||||| | Sbjct 9240 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 9299 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329 | || ||||| || |||||||||||| | || || |||||| | ||| ||| | | Sbjct 9300 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 9359 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || ||||| ||| | || |||||||| ||||| || |||||| |||||| Sbjct 9360 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 9418 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 || || || || || ||||| || |||||||| || || ||||| || ||||| Sbjct 9419 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 9478 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || ||| |||| | | ||| |||||||||| || || ||||||||||| ||||| || Sbjct 9479 ATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 9538 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || || | | || | |||||||| | || |||||||| | ||| Sbjct 9539 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 9598 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 |||||||| ||||| | |||||||| || ||||| || ||| || || | | Sbjct 9599 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 9658 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || |||| |||||||| ||||| ||||||||||| ||| | || ||||| || ||||| Sbjct 9659 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 9718 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||||| ||||| || || | Sbjct 9719 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 9778 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 ||| | |||| | | |||||| | |||| || ||||| ||||| ||||| |||||| Sbjct 9779 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 9838 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 || || ||||| | | ||||| || |||||||| || ||||| ||||| ||||| Sbjct 9839 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 9898 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 ||||| || || || || ||| | ||||| ||||||||| | |||||| || |||||| Sbjct 9899 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 9958 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 || || |||| ||||| || || | ||| | || |||||||| Sbjct 9959 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 10002 >seq14 Length=147140 Score = 690 bits (764), Expect = 0.0 Identities = 748/989 (76%), Gaps = 2/989 (0%) Strand=Plus/Minus Query 183195 CTTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACT 183254 ||||||| | ||||| || ||||| | ||||| || || | || ||||| || | Sbjct 81972 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 81913 Query 183255 GATGATTCCAACTCTGTTGGCAGCAACCATCTGCTTCATCGTTGCCTTCGTCGCTGCTCC 183314 |||||| || || | ||| | ||||| | || || | |||||| |||||||||| Sbjct 81912 GATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 81853 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||| || || || || || || || || || ||| |||| || | | ||||||||||| Sbjct 81852 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 81793 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 || || |||||||| || ||||| |||| || || ||| | || || || || || Sbjct 81792 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 81733 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494 |||||||| ||||| | ||||| ||| | || || || |||||||| | || | || Sbjct 81732 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 81673 Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554 | |||||| | |||| || || || |||||||||||||||||| | || ||| Sbjct 81672 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 81613 Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614 ||| |||||||| |||||||| |||||| ||| || |||||||| ||||| || || Sbjct 81612 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 81553 Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTAT 183674 ||| ||| || | |||||| | |||||||| ||| |||||||||||| | || || Sbjct 81552 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 81493 Query 183675 CAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 183734 ||| || || |||| |||| |||| ||||| || |||||||||||||| ||||| || Sbjct 81492 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 81433 Query 183735 CTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGG 183794 || |||||| | ||||| |||||||| ||||| ||||| || |||||||| ||||| || Sbjct 81432 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 81373 Query 183795 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAACTATG 183853 ||| |||| || || | | | | || | ||||||||||| |||||| || | | Sbjct 81372 TTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGG 81314 Query 183854 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTG 183913 ||||||| || ||||||||||||||||| || |||||||| |||||||| || || |||| Sbjct 81313 GTTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTG 81254 Query 183914 GTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTG 183973 |||| | |||||||| |||||| || ||||| ||||||||| | ||||||||| | | Sbjct 81253 GTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGG 81194 Query 183974 CTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTA 184033 |||||||||| || || || |||||||| |||||| | ||| |||| ||||||||||| | Sbjct 81193 CTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCA 81134 Query 184034 ACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACA 184093 |||| ||||| || || |||||||| || | ||||| |||||||||| || | || | Sbjct 81133 ACCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATA 81074 Query 184094 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATG 184153 | ||||| || | ||||||||||| |||||| |||||||| |||||||| ||||||| Sbjct 81073 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 81014 Query 184154 CTCACAACTTCCCTCTCGACCTTGCTGCT 184182 |||||||||||||||| ||||| |||||| Sbjct 81013 CTCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 493 bits (546), Expect = 2e-134 Identities = 715/1004 (71%), Gaps = 4/1004 (0%) Strand=Plus/Plus Query 185971 TGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGATTACTTCTTT 186030 |||| |||||| | | | ||||| || || ||||| || ||||| || || | || | Sbjct 89671 TGGACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCT 89730 Query 186031 TTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCACAACGTTTGTTACGAGCT 186090 |||| ||||||| | || | || || ||| |||| || || || ||||| || | Sbjct 89731 TTCCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTT 89790 Query 186091 GGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTAATTTTCTCACGGCAGCAG 186150 |||||||||| || ||||| ||| || | || ||| ||||| | || || || | Sbjct 89791 GGTATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGCGGCGG 89850 Query 186151 TGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 186210 | || |||||||| | | | | || ||| | | ||||| ||||| || || | | Sbjct 89851 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 89910 Query 186211 AAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 186270 | || ||| | | || |||| ||| | || || || |||| |||||| || ||||| | Sbjct 89911 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 89970 Query 186271 GAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAATCAGTCG-TCTCGTAGGT 186329 | || ||||| || |||||||||||| | || || |||||| | ||| ||| | | Sbjct 89971 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 90030 Query 186330 ATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTGTCTTTGTTAGTGTATTC 186389 | || || || ||||| ||| | || |||||||| ||||| || |||||| |||||| Sbjct 90031 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 90089 Query 186390 CTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCTCCTTTGGAGTCGCAGCA 186449 || || || || || ||||| || |||||||| || || ||||| || ||||| Sbjct 90090 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 90149 Query 186450 ATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 186509 || || |||| | | ||| |||||||||| || || ||||||||||| ||||| || Sbjct 90150 ATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 90208 Query 186510 ATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAGCAATCCATGGTGTTACT 186569 |||||||| || || || | | || | |||||||| | || |||||||| | ||| Sbjct 90209 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 90268 Query 186570 GTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACATTCAAAGCATTCGATACG 186629 |||||||| ||||| | |||||||| || ||||| || ||| || || | | Sbjct 90269 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 90328 Query 186630 ACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAACAGATTCTGGTCACAGATCTTC 186689 || |||| |||||||| ||||| ||||||||||| ||| | || ||||| || ||||| Sbjct 90329 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 90388 Query 186690 GGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTCATGCTCTTTGTTCCTGTTATG 186749 || |||| ||| |||||| |||||| | |||||||| ||||| ||||| || || | Sbjct 90389 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 90448 Query 186750 GGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCTCTTAACCTTCGTGCTTATGAC 186809 ||| | |||| | | |||||| | |||| || ||||| ||||| ||||| |||||| Sbjct 90449 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 90508 Query 186810 TTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAGTTCGAGACGTTCTATACCAAG 186869 || || ||||| | | ||||| || |||||||| || ||||| ||||| ||||| Sbjct 90509 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 90568 Query 186870 AATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCACCAGTGGATCAACCACATGAA 186929 ||||| || || || || ||| | ||||| ||||||||| | ||||| || |||||| Sbjct 90569 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGC-TCAGATCAGCCTCATGAA 90627 Query 186930 AACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAACGCTCT 186973 || || |||| ||||| || || | ||| | || |||||||| Sbjct 90628 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 90671 >seq4 Length=40407879 Score = 408 bits (452), Expect = 5e-109 Identities = 602/845 (71%), Gaps = 7/845 (1%) Strand=Plus/Plus Query 186132 AATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTA 186191 ||||| | || || || || || |||||||| | | | | || ||| | | ||| Sbjct 27919944 AATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTA 27920003 Query 186192 CTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGG 186251 || ||||| || || | || || ||| | | || |||| ||| | || || || ||| Sbjct 27920004 CTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGG 27920063 Query 186252 AATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAA 186311 | ||| || || ||||| || || ||||| || ||| |||||||| | || || |||||| Sbjct 27920064 ACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGAA 27920122 Query 186312 ATCAGTCG-TCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGC 186370 | ||| ||| | | | || || || ||||| ||| | || ||| |||| ||||| Sbjct 27920123 CTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCGC 27920181 Query 186371 TGTCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCC 186430 || |||||| |||||||| || || || || ||||| || |||||||| || || Sbjct 27920182 AGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCC 27920241 Query 186431 CTCCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTG 186490 ||||| || ||||| || ||| |||| | | ||| |||||||||| || || || Sbjct 27920242 GAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTG 27920301 Query 186491 GACGTTGAATCCATTCCACATGATGGGTGTAG-CAG-GTATCCTTGGTGGTGCTCTGCTG 186548 ||||||||| ||||| || |||||||| || | ||| |||| | |||| |||||||| Sbjct 27920302 GACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTAT--TAGGTGTAGCTCTGCTA 27920359 Query 186549 TCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAAC 186608 | || |||||||| | |||||||||||| ||||| | ||||||||| || ||||| Sbjct 27920360 TGCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAAT 27920419 Query 186609 ACATTCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAAC 186668 || || || || | | || ||||| |||||||| ||||| ||||||| ||| ||| Sbjct 27920420 ACCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAAC 27920479 Query 186669 AGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTTC 186728 | || ||||| || ||||| || |||| ||| |||||| | |||| | |||||||| Sbjct 27920480 CGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTTT 27920539 Query 186729 ATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGCT 186788 ||||| ||||| || || | || | |||| | | |||||| | |||| | ||| Sbjct 27920540 ATGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCT 27920599 Query 186789 CTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGAG 186848 || ||||| | ||| |||||||| | ||||| | | ||||| || |||||||| Sbjct 27920600 CTGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAA 27920659 Query 186849 TTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGCA 186908 || ||||| ||||| ||||| ||||| || || || | ||| | |||| ||||||||| Sbjct 27920660 TTTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGCA 27920719 Query 186909 CCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAAC 186968 | |||||| || |||||||| || |||| ||||| || || | ||| | || ||| Sbjct 27920720 GCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAAAC 27920779 Query 186969 GCTCT 186973 ||||| Sbjct 27920780 GCTCT 27920784 >seq7 Length=35964315 Score = 387 bits (428), Expect = 2e-102 Identities = 364/461 (79%), Gaps = 2/461 (0%) Strand=Plus/Plus Query 183721 ATCCTGATGCACCCCTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTC 183780 ||| | ||||| || || |||||| | ||||| |||||||| ||||| ||||| || ||| Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 183781 AGTGCAATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGA 183839 ||||| ||||| ||||| |||| || | | | | | || | ||||||||||| ||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTA-TAGTTTGATCAGGGAAACCACTGAAAATGA 24459375 Query 183840 GTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGC 183899 ||| || | |||||||| || ||||||||||||| || || |||||||| ||||| Sbjct 24459376 GTCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGC 24459435 Query 183900 TCATGGATACTTTGGTCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCT 183959 |||||| || |||||||| | |||||||| |||||| || ||||| ||| ||||| | Sbjct 24459436 TCATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTT 24459495 Query 183960 TCACTTCTTCCTTGCTGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAG 184019 ||||||||| | ||||||||||| || || || |||||||| |||||| | ||| |||| Sbjct 24459496 ACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAG 24459555 Query 184020 CACTATGGCATTTAACCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGG 184079 ||||||||||| ||||| |||||||| || |||||||| || | ||||| ||||||| Sbjct 24459556 TACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGG 24459615 Query 184080 TCGTGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGAT 184139 ||| || | || || ||||| || | |||||||||| |||||| |||||||| || Sbjct 24459616 TCGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAAT 24459675 Query 184140 GCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 184180 |||||| ||||||||||||||||||||||| ||||| |||| Sbjct 24459676 GCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq8 Length=40689132 Score = 87.8 bits (96), Expect = 2e-12 Identities = 97/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 183790 CACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAA 183848 |||||||| |||| || || | | | | || | ||||||||||| |||||| || Sbjct 1980306 CACGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAA 1980248 Query 183849 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATA 183908 | |||||||| || ||||||||||||| ||| || |||||||| |||||||| || || Sbjct 1980247 TAAGGGTTACAAATTTGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTA 1980188 Query 183909 CTTTGGT 183915 |||||| Sbjct 1980187 TTTTGGT 1980181 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 183790 CACGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACTGAGTCTGAGTCACAGAA 183848 |||||||| |||| || || | | | | || | ||||||| ||| |||||| || Sbjct 30663754 CACGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCAGTGAAAATGAGTCTGCTAA 30663696 Query 183849 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATA 183908 | |||||||| || ||||||||||||| ||| || |||||||| |||||||| || || Sbjct 30663695 TAAGGGTTACAAATTAGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTA 30663636 Query 183909 CTTTGGT 183915 |||||| Sbjct 30663635 TTTTGGT 30663629 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 183823 GAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 183882 ||||||||||| |||||| || | |||||||| || ||||||||||||| ||| Sbjct 30734572 GAAACCACTGAAAATGAGTCTGCTAATAAGGGTTACAAATTTGGTCAAGAAGAAGGGACT 30734513 Query 183883 TACAACATTGTCGCTGCTCATGGATACTTTGGT 183915 || |||||||| |||||||| || || |||||| Sbjct 30734512 TATAACATTGTGGCTGCTCACGGTTATTTTGGT 30734480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622067779528440