Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq337 715 0.0 seq14 715 0.0 seq4 428 5e-115 seq7 343 2e-89 seq1 150 2e-31 seq8 87.8 2e-12 >seq337 Length=135516 Score = 715 bits (792), Expect = 0.0 Identities = 753/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 ||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || || Sbjct 1626 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 1567 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGTTTCATCATCGCCTTCATCGGTGCTCC 164046 ||||| |||| ||| | | | || ||| | || || ||||||||||||| |||||| Sbjct 1566 ATGAT-CCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 1508 Query 164047 TCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 164106 ||| || || || ||||| || || || || || ||||||| | | ||||||||||| Sbjct 1507 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 1448 Query 164107 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 164166 || || ||||||||| |||| ||| ||||| || ||||| |||| || ||||| || Sbjct 1447 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 1388 Query 164167 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 164226 |||||||| ||| | | || |||||| | ||||| || ||||||| | || |||| Sbjct 1387 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1328 Query 164227 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 164286 | |||||| | |||| | | ||| ||||||||||||||||||||| || ||| Sbjct 1327 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 1268 Query 164287 TCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 164346 ||| |||||||| ||||||||| || ||||| || |||||||| || || || | ||| Sbjct 1267 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 1208 Query 164347 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 164406 || ||| || | |||||| | |||||||| ||||||||||| |||||| | || || Sbjct 1207 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 1148 Query 164407 CTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCC 164466 ||||| || ||||||| ||| | || |||||||| |||||||||||||| ||||| || Sbjct 1147 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 1088 Query 164467 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 164526 || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| || Sbjct 1087 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 1028 Query 164527 TTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGG 164586 ||| |||| || ||| || | | || ||||| ||||||||||| || | || Sbjct 1027 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 968 Query 164587 TTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGG 164646 |||||| |||||||| |||||||| || || ||||| || || ||||||||||| ||||| Sbjct 967 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 908 Query 164647 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGC 164706 ||| | || |||||||| ||| ||||||||||| ||||| | ||||||||| | || Sbjct 907 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 848 Query 164707 AGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAA 164766 || |||||||| || || |||||||| |||||| | || |||| || ||||||||||| Sbjct 847 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 788 Query 164767 CCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACAC 164826 ||| || || ||||| |||||||| || | | ||| |||| ||||| || | || || Sbjct 787 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 728 Query 164827 CTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGC 164886 ||||| || | ||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct 727 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 668 Query 164887 TCACAACTTCCCTCTCGACCTTGCTGCT 164914 ||||||||||||||| ||||| |||||| Sbjct 667 TCACAACTTCCCTCTAGACCTAGCTGCT 640 Score = 601 bits (666), Expect = 4e-167 Identities = 742/1008 (74%), Gaps = 6/1008 (1%) Strand=Plus/Plus Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224 ||||||||| | ||| ||||||||||||||||| || ||||| || || | || ||| Sbjct 9002 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 9061 Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 165284 || ||||||| | ||| | ||||||||| |||| ||||||||||| || || |||| Sbjct 9062 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 9121 Query 165285 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 165342 ||||| || ||| | || ||||||||| | || ||| |||| ||||||| | ||||| | Sbjct 9122 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 9179 Query 165343 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTC 165402 |||| ||||| || | | | | || ||| | |||| |||||||| || || | | Sbjct 9180 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 9239 Query 165403 AAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 165462 | ||||| || | || ||||| ||| | || || || ||||||||||| || ||||| | Sbjct 9240 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 9299 Query 165463 GAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGT 165521 | || |||||||| |||||||||||| | || || |||||||| || || || || | Sbjct 9300 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 9359 Query 165522 ATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTT 165581 | || ||||| ||||| ||| | ||||||||||| || || || || ||| || || Sbjct 9360 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 9418 Query 165582 CTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCA 165641 ||||| ||||| ||||||||||| |||||||| || ||| || || || ||||| Sbjct 9419 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 9478 Query 165642 ATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCAC 165701 || || ||||| | || ||| ||||||| || ||||| |||||| |||| || ||||| Sbjct 9479 ATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 9538 Query 165702 ATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACA 165761 |||||||| || || || | ||||||| ||| |||| | || || ||||| | ||| Sbjct 9539 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 9598 Query 165762 GTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGT 165821 ||||| || ||| | | ||||||||||| ||||| || ||| || ||| | Sbjct 9599 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 9658 Query 165822 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTT 165881 ||||| | || ||||||||||| ||||||||||||||||| || ||||| || || ||| Sbjct 9659 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 9718 Query 165882 GGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATG 165941 ||| ||||||| |||||| |||||| | || ||||||||||| ||||| || |||| Sbjct 9719 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 9778 Query 165942 GGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGAT 166001 || | |||| ||| ||||||| | |||| || || || || || ||||| ||||| Sbjct 9779 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 9838 Query 166002 TTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAA 166061 || || || ||||| || | || || || ||||| || ||||| || ||||| || ||| Sbjct 9839 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 9898 Query 166062 AACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAG 166121 || || || | || || || | ||||| ||| |||| || || || |||||||| Sbjct 9899 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 9958 Query 166122 AACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || | |||||||| || || | ||| | || ||||| |||||| Sbjct 9959 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 10006 >seq14 Length=147140 Score = 715 bits (792), Expect = 0.0 Identities = 753/988 (76%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987 ||||| |||||| ||||| ||||| || ||| | || |||| |||||||| || || Sbjct 81971 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 81912 Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGTTTCATCATCGCCTTCATCGGTGCTCC 164046 ||||| |||| ||| | | | || ||| | || || ||||||||||||| |||||| Sbjct 81911 ATGAT-CCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCCTTCATCGCTGCTCC 81853 Query 164047 TCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAA 164106 ||| || || || ||||| || || || || || ||||||| | | ||||||||||| Sbjct 81852 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 81793 Query 164107 CATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCAT 164166 || || ||||||||| |||| ||| ||||| || ||||| |||| || ||||| || Sbjct 81792 TATTATTTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCATTTTTACCCAAT 81733 Query 164167 CTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGT 164226 |||||||| ||| | | || |||||| | ||||| || ||||||| | || |||| Sbjct 81732 TTGGGAAGCTGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 81673 Query 164227 GTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCG 164286 | |||||| | |||| | | ||| ||||||||||||||||||||| || ||| Sbjct 81672 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 81613 Query 164287 TCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGC 164346 ||| |||||||| ||||||||| || ||||| || |||||||| || || || | ||| Sbjct 81612 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 81553 Query 164347 AGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCAT 164406 || ||| || | |||||| | |||||||| ||||||||||| |||||| | || || Sbjct 81552 TGTTTTCTTGATTTATCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAAT 81493 Query 164407 CTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACCC 164466 ||||| || ||||||| ||| | || |||||||| |||||||||||||| ||||| || Sbjct 81492 ATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCGGAGCACAACATCCTTATGCATCC 81433 Query 164467 CTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGG 164526 || || ||| | || ||||| ||||| || |||||||| || |||||||| ||||| || Sbjct 81432 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 81373 Query 164527 TTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATGG 164586 ||| |||| || ||| || | | || ||||| ||||||||||| || | || Sbjct 81372 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAATGAGGG 81313 Query 164587 TTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTGG 164646 |||||| |||||||| |||||||| || || ||||| || || ||||||||||| ||||| Sbjct 81312 TTACAAATTTGGTCAAGAAGAAGAGACTTATAACATTGTGGCTGCTCACGGTTATTTTGG 81253 Query 164647 TCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGC 164706 ||| | || |||||||| ||| ||||||||||| ||||| | ||||||||| | || Sbjct 81252 TCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 81193 Query 164707 AGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCAA 164766 || |||||||| || || |||||||| |||||| | || |||| || ||||||||||| Sbjct 81192 TGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCATTCAA 81133 Query 164767 CCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACAC 164826 ||| || || ||||| |||||||| || | | ||| |||| ||||| || | || || Sbjct 81132 CCTAAATGGATTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGCGTTATTAATAC 81073 Query 164827 CTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATGC 164886 ||||| || | ||||||||||| ||| || |||||||| |||||||| |||||||| Sbjct 81072 TTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGC 81013 Query 164887 TCACAACTTCCCTCTCGACCTTGCTGCT 164914 ||||||||||||||| ||||| |||||| Sbjct 81012 TCACAACTTCCCTCTAGACCTAGCTGCT 80985 Score = 600 bits (664), Expect = 1e-166 Identities = 743/1008 (74%), Gaps = 8/1008 (1%) Strand=Plus/Plus Query 165165 GACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTT 165224 ||||||||| | ||| ||||||||||||||||| || ||||| || || | || ||| Sbjct 89673 GACGACTGGTTACGAAGGGACCGTTTCGTTTTTGTAGGATGGTCCGGCCTATTGCTCTTT 89732 Query 165225 CCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGG 165284 || ||||||| | ||| | ||||||||| |||| ||||||||||| || || |||| Sbjct 89733 CCTTGTGCTTATTTCGCTTTAGGGGGTTGGTTTACAGGGACTACTTTTGTAACTTCTTGG 89792 Query 165285 TATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 165342 ||||| || ||| | || ||||||||| | || ||| |||| ||||||| | ||||| | Sbjct 89793 TATACCCATGGATTGGCTAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGCGGCGG 89850 Query 165343 TTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGGGTCCTGAGTCTC 165402 |||| ||||| || | | | | || ||| | |||| |||||||| || || | | Sbjct 89851 TTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 89910 Query 165403 AAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACG 165462 | ||||| || | || ||||| ||| | || || || ||||||||||| || ||||| | Sbjct 89911 AGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTCGCTCTCCATG 89970 Query 165463 GAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCACGA-CTTATCGGT 165521 | || |||||||| |||||||||||| | || || |||||||| || || || || | Sbjct 89971 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT 90030 Query 165522 ATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTT 165581 | || ||||| ||||| ||| | ||||||||||| || || || || ||| || || Sbjct 90031 -TGCGGCCTTATAATGCAATTTCATTCTCTGGTCCAATCGCAGTTTTTGTTTCCGTATTC 90089 Query 165582 CTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCA 165641 ||||| ||||| ||||||||||| |||||||| || ||| || || || ||||| Sbjct 90090 CTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCT 90149 Query 165642 ATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCAC 165701 || ||| |||| | || ||| ||||||| || ||||| |||||| |||| || ||||| Sbjct 90150 ATATTC-GATTTATCCTTTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 90208 Query 165702 ATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACA 165761 |||||||| || || || | ||||||| ||| |||| | || || ||||| | ||| Sbjct 90209 ATGATGGGAGTTGCCGGAGTATTAGGCGCAGCTCTGCTATGCGCTATCCATGGGGCTACC 90268 Query 165762 GTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGT 165821 ||||| || ||| | | ||||||||||| ||||| || ||| || ||| | Sbjct 90269 GTAGAAAACACTCTATTCGAAGATGGTGATGGTGCAAATACCTTCCGCGCTTTTAACCCA 90328 Query 165822 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTT 165881 ||||| | || ||||||||||| ||||||||||||||||| || ||||| || || ||| Sbjct 90329 ACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTCCCAAATCTTT 90388 Query 165882 GGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATG 165941 ||| ||||||| |||||| |||||| | || ||||||||||| ||||| || |||| Sbjct 90389 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCACC 90448 Query 165942 GGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGAT 166001 || | |||| ||| ||||||| | |||| || || || || || ||||| ||||| Sbjct 90449 GGTTTATGGATGAGTGCTATTGGCGTAGTTGGCCTGGCTCTGAACCTACGTGCCTATGAC 90508 Query 166002 TTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAA 166061 || || || ||||| || | || || || ||||| || ||||| || ||||| || ||| Sbjct 90509 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 90568 Query 166062 AACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCATGAG 166121 || || || | || || || | ||||| ||| |||| || ||| || |||||||| Sbjct 90569 AATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCT-CAGATCAGCCTCATGAA 90627 Query 166122 AACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169 || || | |||||||| || || | ||| | || ||||| |||||| Sbjct 90628 AATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAA 90675 >seq4 Length=40407879 Score = 428 bits (474), Expect = 5e-115 Identities = 607/848 (72%), Gaps = 4/848 (0%) Strand=Plus/Plus Query 165324 AACTTTCTTA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCT 165382 || ||||||| | ||||| ||||| ||||| || | | | | || ||| | |||| Sbjct 27919943 AAATTTCTTAACCGCGGCGGTTTCCACTCCTGCCAATAGTTTAGCACACTCTTTGTTGCT 27920002 Query 165383 TCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTG 165442 |||||||| || || | || ||||| || | || ||||| ||| | || || || || Sbjct 27920003 ACTATGGGGCCCGGAAGCACAGGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTG 27920062 Query 165443 GACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGA 165502 |||||| || || ||||| || || |||||||| ||| |||||||| | || || ||||| Sbjct 27920063 GACTTT-GTCGCTCTCCATGGGGCTTTTGCACTAATAAGTTTCATGTTACGTCAATTTGA 27920121 Query 165503 ACTGGCACGA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTG 165561 ||| || || || || | | || ||||| ||||| ||| | |||||| |||| || | Sbjct 27920122 ACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTCTAGTCCAATCG 27920180 Query 165562 CTGTATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCAC 165621 | || || ||| || || ||||| ||||| ||||||||||| |||||||| || | Sbjct 27920181 CAGTTTTTGTTTCCGTATTCCTTATTTATCCACTGGGACAATCTGGTTGGTTCTTTGCGC 27920240 Query 165622 CGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACT 165681 || || || || ||||| || || ||||| | || ||| ||||||| || ||||| | Sbjct 27920241 CGAGTTTTGGCGTAGCAGCTATATTTCGATTTATCCTTTTCTTCCAAGGATTTCATAATT 27920300 Query 165682 GGACGCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTT 165741 ||||| |||| || ||||| |||||||| || || | | ||||| | ||| |||| | Sbjct 27920301 GGACGTTGAACCCATTTCATATGATGGGAGTTGCCAGAGTATTAGGTGTAGCTCTGCTAT 27920360 Query 165742 CTGCCATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACA 165801 || || ||||| | ||| ||||| || ||| | | |||||||||||| ||||| | Sbjct 27920361 GCGCTATCCATGGGGCTACTGTAGAAAACACTCTATTTGAAGATGGTGATGGTGCAAATA 27920420 Query 165802 CTTTCAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACC 165861 | || || ||| | ||||| || || ||||||||||| ||||||| |||||||| Sbjct 27920421 CCTTTCGCGCTTTTAACCCAACTCAAGATGAAGAAACTTATTCAATGGTCATTGCTAACC 27920480 Query 165862 GTTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTA 165921 | || ||||| || || |||||| ||||||| |||||| | |||| | || ||||||| Sbjct 27920481 GCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACATTGGTTACATTTCTTTA 27920540 Query 165922 TGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCAC 165981 |||| ||||| || |||| | | |||| ||| ||||||| | |||| | || | Sbjct 27920541 TGCTATTTGTACCCGTCACCAGTTTATGGATGAGTGCTATTGGCGTAGTTGGCTTGGCTC 27920600 Query 165982 TCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGT 166041 | || || | ||| ||||| || | || ||||| || | || || || ||||| || | Sbjct 27920601 TGAACCTACATGCCTATGACTTCATTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAAT 27920660 Query 166042 TTGAAACGTTCTATACGAAAAACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTC 166101 |||| || ||||| || ||||| || || | || | || | |||| ||| |||| Sbjct 27920661 TTGAGACTTTCTACACCAAAAATATTCTTTTAAACCAGGGTATTTGTGCGTGGATGGCAG 27920720 Query 166102 CTGTAGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACG 166161 || || || |||||||| || || | |||||||| || || | ||| | || |||| Sbjct 27920721 CTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCTACCATGTGGAAACG 27920780 Query 166162 CACTTTAA 166169 | |||||| Sbjct 27920781 CTCTTTAA 27920788 >seq7 Length=35964315 Score = 343 bits (380), Expect = 2e-89 Identities = 352/460 (77%), Gaps = 0/460 (0%) Strand=Plus/Plus Query 164453 ATCCTCATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTC 164512 ||| | ||||| || || || ||| | || ||||| ||||| || |||||||| || ||| Sbjct 24459257 ATCATTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 24459316 Query 164513 AGTGCAATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAG 164572 ||||| ||||| ||||| |||| || | | || | | || ||||| ||||||||| Sbjct 24459317 AGTGCTATGCATGGTTCCTTGGTAACCTATAGTTTGATCAGGGAAACCACTGAAAATGAG 24459376 Query 164573 TCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCT 164632 || || | |||||||| |||||||| ||||||| | || ||||| || || ||| Sbjct 24459377 TCTGCTAATGAGGGTTACAAATTTGGTCAAGAAGAAGGGATTTATAACATTGTGGCTGCT 24459436 Query 164633 CACGGTTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTG 164692 || ||||| |||||||| | || |||||||| ||| ||||||||||| |||| | Sbjct 24459437 CATGGTTATTTTGGTCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTTGTTCTTTA 24459496 Query 164693 CACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGC 164752 ||||||||| | || || |||||||| || || |||||||| |||||| | || |||| Sbjct 24459497 CACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATCTGGTTCACTGCTTTAGGTATTAGT 24459556 Query 164753 ACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGT 164812 || |||||||||||||| || |||||||| |||||||| || | | ||| |||| ||| Sbjct 24459557 ACTATGGCATTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 24459616 Query 164813 CGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATG 164872 || || | || || ||||| || | |||||||||| ||| || |||||||| ||| Sbjct 24459617 CGCGTTATTAATACTTGGGCTGATATCACCAACCGTGCTAATCTTGGTATGGAAGTAATG 24459676 Query 164873 CACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTG 164912 ||||| ||||||||||||||||||||||| ||||| |||| Sbjct 24459677 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTG 24459716 >seq1 Length=42145699 Score = 150 bits (166), Expect = 2e-31 Identities = 183/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Plus Query 165822 ACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATTTTT 165881 ||||| | || ||||||||||| ||||||| ||||||||| || |||||||| || ||| Sbjct 27067133 ACTCAAGCTGAAGAAACTTATTCAATGGTCATTGCTAACCGCTTGTGGTCTCAAATATTT 27067192 Query 165882 GGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTCATG 165941 ||| ||||||| |||||| ||||| | || ||||||||||| ||||| || |||| Sbjct 27067193 GGTGTTGCTTTTTCCAATAAATGTTGGTTACATTTCTTTATGCTATTTGTACCCGTCA-C 27067251 Query 165942 GGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTATGAT 166001 || | |||| | | ||||||| | | || || || || || || ||||| ||||| Sbjct 27067252 CGATTATGGATGACTGCTATTGGCGTAGTAGGCCTGGCTCTGAACCTACGTGCCTATGAC 27067311 Query 166002 TTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACGAAA 166061 || | || || || || | || || || ||||| || ||| | || ||||| || ||| Sbjct 27067312 TTCATTTCCCATGAAATCCGTGCAGCGGAAGATCCTGAATTTTAGACTTTCTACACCAAA 27067371 Query 166062 AACATCCT 166069 || || || Sbjct 27067372 AATATTCT 27067379 >seq8 Length=40689132 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 164522 CACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAAC 164581 |||||||| |||| || ||| || | | || ||||| ||||||||||| || Sbjct 1980306 CACGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAATGAGTCTGCTAAT 1980247 Query 164582 TATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTAC 164641 | |||||||| |||||||| ||||||| || || ||||| || || ||||||||||| Sbjct 1980246 AAGGGTTACAAATTTGGTCAAGAAGAAGGGACTTATAACATTGTGGCTGCTCACGGTTAT 1980187 Query 164642 TTTGGT 164647 |||||| Sbjct 1980186 TTTGGT 1980181 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 164555 GAGACCACCGAAAATGAGTCCCAGAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACC 164614 || ||||| ||||||||||| || | |||||||| |||||||| ||||||| || Sbjct 30734572 GAAACCACTGAAAATGAGTCTGCTAATAAGGGTTACAAATTTGGTCAAGAAGAAGGGACT 30734513 Query 164615 TACAACATCGTTGCCGCTCACGGTTACTTTGGT 164647 || ||||| || || ||||||||||| |||||| Sbjct 30734512 TATAACATTGTGGCTGCTCACGGTTATTTTGGT 30734480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557652050880840