Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Setaria_20italica_20[refseq_20GCF_5F000263155.2_202015-10-30] 337 sequences; 405,868,399 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 4e-12 >seq8 Length=40689132 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 70397 TTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTATATCAACGTAGTGCTGAC 70456 ||||| || | ||| || |||| |||| || |||||| | |||||||| ||| ||| Sbjct 23092172 TTCCAGTTTTATGTTGAGAATGGGGAGCTATCCTGCCAGATGTATCAACGCTCTGCAGAC 23092231 Query 70457 ATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTACTTACACATCTTATTGCT 70516 || ||||||||| |||||||| |||||||||||| | | |||||| | | |||||| Sbjct 23092232 ATGGGACTTGGTGTTCCATTCAACATTGCATCATATTCTCTTCTTACATACATGATTGCT 23092291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335573021733019