Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq11 107 1e-18 >seq11 Length=5849386 Score = 107 bits (118), Expect = 1e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || ||||||||||||||||| | || ||||| ||| ||||| ||||||||||| | Sbjct 3123633 ACGTGAGCAATCATGCAAGTCAGCAGGGAATATGAAGCGATGTTGAATGGCACTCCAAGA 3123574 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAAT 101875 ||||| || || |||| ||| |||| |||||||||||||| ||||| | |||||||| Sbjct 3123573 CCCATGTCTGCAGATCGTTGGTACATTTGACAGGAAAGCTCTCCATTGGAAACATAAAAC 3123514 Query 101876 TG 101877 || Sbjct 3123513 TG 3123512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361251111945020