Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq19 107 2e-18 >seq19 Length=3929835 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 |||| |||| ||| | || || ||||||||||||||||| |||||||| ||||||| Sbjct 2580348 ACGGCGTGAGGAACTCCCTCCTGGTGGCCCCCATGCCCACCGCCTCCACCAGCCAGATCC 2580407 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 | ||||||||||||| ||||| |||| |||||||||| | |||| | | |||| ||| Sbjct 2580408 TCGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAACATCTACAGCCGCAGGGTCCTC 2580466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723076319200