Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 6e-13 seq3 91.5 6e-13 >seq8 Length=7641483 Score = 91.5 bits (100), Expect = 6e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||| | || |||||||||||||| || || ||| ||||| ||| | | ||| Sbjct 7582022 GTTTTGACAAAAATGAAAGAAACTGCCGAGGCTTATCTTGGTAAGAGTGTTTCGAAAGCA 7582081 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || | || ||||| |||||||||||||| || ||| | || || || |||||||| || Sbjct 7582082 GTGGTCACAGTTCCAGCTTATTTCAATGACGCGCAAAGACAGGCTACAAAAGATGCGGGG 7582141 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 ||| | || | |||| | || || ||||||||||| || || |||||||| | Sbjct 7582142 AGAATTTCGGGGCTTGATGTGCAGCGTATCATTAATGAACCCACTGCTGCTGCTCTCTCT 7582201 Query 451445 TATGGACT 451452 ||||| || Sbjct 7582202 TATGGGCT 7582209 >seq3 Length=8976907 Score = 91.5 bits (100), Expect = 6e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||||||||| ||||| || |||| || ||||| || || ||| | ||||| |||| Sbjct 2430283 ATTGGAATTGACCTTGGTACAACCTACTCCTGTGTTGGAGTGTACAAGAATGGCCATGTT 2430224 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 || || || || |||||||||||| |||| |||||||||||||| ||||| ||| Sbjct 2430223 GAGATCATCGCCAATGACCAAGGAAACCGAATCACTCCTTCATGGGTGGCCTTTACTGAT 2430164 Query 451037 TCAGAAAG 451044 ||||| Sbjct 2430163 AGTGAAAG 2430156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717893722160