Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17]
20 sequences; 136,670,443 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq19 111 8e-20
>seq19
Length=3929835
Score = 111 bits (122), Expect = 8e-20
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 26065 ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAA 26124
|||||||||||| |||||||||||||| || || | ||||| |||||||| || |||
Sbjct 2578438 ACCTTTTCTTTTCCCTCCACCTTGATCAACATACCGAGCAGTGTCATTGAAGACCCGCAA 2578379
Query 26125 CATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCT 26184
||||||||| | ||| | || ||||| || | | | || | || || | ||
Sbjct 2578378 CATTGGAACAATGCCATTAGATGTACCGTTCGTTCCACGGATATAACTGCCAGTTGCTCG 2578319
Query 26185 AATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA 26244
||||| ||| || || ||||||||| ||||| |||| ||| | || || ||
Sbjct 2578318 AATATTATGAACAGAAACACCGATTCCTCCAGCAGATTTGCTTATAACCGCGCATTCCTT 2578259
Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
| ||| || ||||||||| ||||||||| |||||||
Sbjct 2578258 CAATGTGTCATAAATTCCTTCAATGCTATCATCTTTCAT 2578220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039938321500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |