Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17]
20 sequences; 136,670,443 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq16 84.2 1e-11
>seq16
Length=4450370
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| || || | ||| | |||| || || ||| ||| || || ||||| || |||| |
Sbjct 3338530 CCTCCCCTGAGACGAAGGACCAGGTGGAGCGTGGACTCCTTCTGGATGTTATAGTCGGCG 3338471
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| |||| |||| || || ||||| || |||| ||||||||| || | ||
Sbjct 3338470 AGGGTGCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGACGCTGCTGGTCCGGGGGG 3338411
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || || |||| | | ||| | |||||| || |||||
Sbjct 3338410 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCAC 3338352
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | |||||| || || || || | || || || |||||||||||
Sbjct 3338351 CTCCARCGTGATGGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 3338304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703919878400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |