Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq6 100 3e-16 >seq6 Length=8045491 Score = 100 bits (110), Expect = 3e-16 Identities = 115/154 (75%), Gaps = 3/154 (2%) Strand=Plus/Plus Query 181396 CTGCTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTG 181455 ||||||| ||| | |||| ||| | |||||||| ||| ||||| | || | || | Sbjct 2591563 CTGCTGTTTTCTTGATCTACCCTATTGGTCAAGGAAGTTTTTCTGATGGTTTGTCTCTAG 2591622 Query 181456 GCATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGC 181515 | || |||||||||||||||| ||| |||| ||| | |||| | |||| || |||| Sbjct 2591623 GAATTTCTGGTACATTCAACTTCATAATTGTATTCAAGACAGAAC---ACATCCTTATGC 2591679 Query 181516 ATCCCTTCCACATGTTGGGTGTCGCAGGTGTATT 181549 | || ||||||||||| || || || |||||||| Sbjct 2591680 ACCCATTCCACATGTTAGGCGTAGCTGGTGTATT 2591713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614617446345600