Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17]
20 sequences; 136,670,443 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq19 131 2e-25
seq7 89.7 7e-13
>seq19
Length=3929835
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809
||| || ||||| | || | ||||||| ||| |||| | || ||| |||| ||| ||
Sbjct 2578423 TCCACCTTGATCAACATACCGAGCAGTGTCATTGAAGACCCGCAACATTGGAACAATGCC 2578364
Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869
||||||| |||| || |||||| |||||||| || |||| ||||||||| || |||
Sbjct 2578363 ATTAGATGTACCGTTCGTTCCACGGATATAACTGCCAGTTGCTCGAATATTATGAACAGA 2578304
Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929
| ||| |||||||| || ||| || | || || |||||||||||||| ||
Sbjct 2578303 AACACCGATTCCTCCAGCAGATTTGCTTATAACCGCGCATTCCTTCAATGTGTCATAAAT 2578244
Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
|| || |||||||||||| ||||| || || || |||||
Sbjct 2578243 TCCTTCAATGCTATCATCTTTCATGCAAATTAGGAAGCAGCT 2578202
>seq7
Length=7914316
Score = 89.7 bits (98), Expect = 7e-13
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||||||||| || || |||||||| || | || | ||||| || || |||||
Sbjct 1958919 GCAGGCGAAGTCGCAGTGGAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAG 1958978
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAAGA 39734
|| ||||| || || ||||| |||||||| || ||||| ||| ||| | || || ||||
Sbjct 1958979 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGC-GCAGAAGCTGCCGGAGAAGA 1959037
Query 39735 AGATGCCTTCTAC 39747
||||||| || ||
Sbjct 1959038 AGATGCCCTCGAC 1959050
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908628272800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |