Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 9e-16 >seq8 Length=7641483 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || || || ||| | || || || || ||||| | || Sbjct 6352119 ATGCAGATATTCGTGAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTCY 6352060 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| ||||| |||||||| || || Sbjct 6352059 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATACCACCGGACCAG 6352000 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| | ||| | | || |||||| Sbjct 6351999 CAGCGGCTGATCTTCGCCGGGAAGCAGCTCGAGGACGGCCGAACCCTAGCGGACTACAAC 6351940 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||||||| Sbjct 6351939 ATCCAGAAGGAGTCGACC 6351922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918291270400