Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spirodela_20polyrhiza_20[genbank_20GCA_5F001981405.1_202017-01-17] 20 sequences; 136,670,443 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq19 129 8e-25 >seq19 Length=3929835 Score = 129 bits (142), Expect = 8e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||||| ||| | || | ||||||||||| |||||| Sbjct 2578422 CCACCTTGATCAACATACCGAGCAGTGTCATTGAAGACCCGCAACATTGGAACAATGCCA 2578363 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 ||||||||||| || |||||| |||||||| ||| ||| ||||||||| || ||| Sbjct 2578362 TTAGATGTACCGTTCGTTCCACGGATATAACTGCCAGTTGCTCGAATATTATGAACAGAA 2578303 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| || | || || |||||||||||||| || Sbjct 2578302 ACACCGATTCCTCCAGCAGATTTGCTTATAACCGCGCATTCCTTCAATGTGTCATAAATT 2578243 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974 || || || |||||||| ||||| || || || ||||| Sbjct 2578242 CCTTCAATGCTATCATCTTTCATGCAAATTAGGAAGCAGCT 2578202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934221766400