Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq232474 86.0 4e-12 >seq232474 Length=955513 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 ||||| || | || || |||||||| || |||||||||| | | || || || || Sbjct 317746 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGCAAGAGTGCGTCCATCCTCA 317805 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 | |||||| || ||| || || ||||||||||| | ||| ||||| ||||| || Sbjct 317806 AGTTGCTTGCCGGCAAAGATCAACCGTTGCTGGTCTGGGGGGATGCCCTCTTTGTCCTGG 317865 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| | ||| || | | ||||||||| | | ||| || || || || || || Sbjct 317866 ATCTTCGCTTTGACATTATCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 317925 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || || || || || || || ||||||||| Sbjct 317926 CCGGTGAGGGTCTTCACAAAGATTTGCATG 317955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317691950982222