Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_014564.2 Length=45413 Score E Sequences producing significant alignments: (Bits) Value seq139814 82.4 2e-11 SEQ30503 82.4 2e-11 >seq139814 Length=16632 Score = 82.4 bits (90), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1114 GCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGGGCGTGGTGGAT 1173 || ||||| ||||| ||||| ||| | ||| |||||||| |||||||||||||| Sbjct 1901 GCGCCGCGGTCGGGGCTGGCGTGGAAGCACTCGATCGACGTGGGCGCGGGCGTGGTGGAC 1842 Query 1174 CCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACCACAATTTCAAC 1233 ||| |||||||| || ||| | || || |||| |||||| | | ||| | Sbjct 1841 GCCGACTACCGGGGCCCCGTCGGGGTCATCCTCTTCAACCACTCGGACGCCGACTTCGCC 1782 Query 1234 GTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAGGCGTACTCGGCTCCGCCGACG 1293 ||| || |||||| | ||||||||||||| | ||| | ||| | | | |||| Sbjct 1781 GTGAGGCCCGGGGACCGCGTCGCGCAGCTGGTCATCGAGAGG--ATCGCCACGCCGGACG 1724 Query 1294 --GCGGAGGTGGAGAGCCACGCGGCGACGGAGCGCGGGGACCGCGGGTTCGGGTCGACGG 1351 || |||||||| || || || || | | || || |||| |||||||| || | Sbjct 1723 TCGCCGAGGTGGACGACCTCGACGCCACCGTCAGGGGCGAGGGCGGCTTCGGGTCCACCG 1664 Query 1352 GCG 1354 ||| Sbjct 1663 GCG 1661 >SEQ30503 Length=62412 Score = 82.4 bits (90), Expect = 2e-11 Identities = 165/243 (68%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 1114 GCCCCGCGCTCGGGTCTGGCCGCGAAATTTTTGATAGACGTGGGGGCGGGCGTGGTGGAT 1173 || ||||| ||||| ||||| ||| | ||| |||||||| |||||||||||||| Sbjct 44720 GCGCCGCGGTCGGGGCTGGCGTGGAAGCACTCGATCGACGTGGGCGCGGGCGTGGTGGAC 44661 Query 1174 CCCGGTTACCGGGGGGAAGTGAAGGTGGTGCTGTTTAACCTGTCGGACCACAATTTCAAC 1233 ||| |||||||| || ||| | || || |||| |||||| | | ||| | Sbjct 44660 GCCGACTACCGGGGCCCCGTCGGGGTCATCCTCTTCAACCACTCGGACGCCGACTTCGCC 44601 Query 1234 GTGCGGGAGGGGGACAGGATCGCGCAGCTGGTTTTGGAGGCGTACTCGGCTCCGCCGACG 1293 ||| || |||||| | ||||||||||||| | ||| | ||| | | | |||| Sbjct 44600 GTGAGGCCCGGGGACCGCGTCGCGCAGCTGGTCATCGAGAGG--ATCGCCACGCCGGACG 44543 Query 1294 --GCGGAGGTGGAGAGCCACGCGGCGACGGAGCGCGGGGACCGCGGGTTCGGGTCGACGG 1351 || |||||||| || || || || | | || || |||| |||||||| || | Sbjct 44542 TCGCCGAGGTGGACGACCTCGACGCCACCGTCAGGGGCGAGGGCGGCTTCGGGTCCACCG 44483 Query 1352 GCG 1354 ||| Sbjct 44482 GCG 44480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144718177304250