Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq257826 96.9 1e-14 seq173476 95.1 5e-14 SEQ37921 95.1 5e-14 seq220121 91.5 6e-13 seq240551 84.2 9e-11 seq218049 84.2 9e-11 seq172622 84.2 9e-11 seq154107 84.2 9e-11 seq133562 84.2 9e-11 seq115148 84.2 9e-11 SEQ54043 84.2 9e-11 SEQ29207 84.2 9e-11 >seq257826 Length=278361 Score = 96.9 bits (106), Expect = 1e-14 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 |||||| | || || || ||||| || || || || || || ||||||||||| || | | Sbjct 130095 ATTTTCATCAAGACCCTTACTGGCAAGACCATCACCCTAGAGGTTGAATCATCGGACACC 130036 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | | || || ||||| || ||||| || || || || || || ||||| Sbjct 130035 ATTGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCATCAACGC 129976 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || ||| | || || || ||||| ||||| | ||| |||| ||||| || ||| | Sbjct 129975 CTGATCTTCGCTGGTAAGCAGCTTGAGGATGGTCGCACTCTGGCTGATTACAACATTCAG 129916 Query 391236 AAGGATGCAACACTTCAC 391253 ||||| | || || ||| Sbjct 129915 AAGGAGTCTACTCTCCAC 129898 Score = 86.0 bits (94), Expect = 2e-11 Identities = 135/192 (70%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || ||||| || || || || ||||| || || || || Sbjct 76829 ATGCAGATATTCGTGAAAACCCTCACTGGCAAGACCATCACACTTGAGGTAGAGTCTTCG 76770 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||| || || || ||||| ||||| || || ||||| Sbjct 76769 GATACAATTGACAATGTCAAGGCAAAGATACAGGACAAGGAGGGAATCCCACCGGATCAG 76710 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC-TTTGGCGGATTATAA 391228 ||| | | || || | || || || ||||||||||| | || || || ||||| || Sbjct 76709 CAATGGCTCATCTTTGCTGGCAAGCAGCTTGAAGATGGGCGGACGCTTTGCTGATTACAA 76650 Query 391229 TATTGATAAGGA 391240 ||| | ||||| Sbjct 76649 TATCCAGAAGGA 76638 >seq173476 Length=157404 Score = 95.1 bits (104), Expect = 5e-14 Identities = 196/290 (68%), Gaps = 5/290 (2%) Strand=Plus/Plus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || | ||||| || ||||| ||||||||| | || |||| ||||| || |||| Sbjct 88265 ATGCCGTTGTCACTGTGCCTGCTTACTTCAATGATTCCCAGAGGCAGGCAACCAAGGATG 88324 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || |||||||||| | ||||| | || || || || || || ||||||||||| Sbjct 88325 CTGGTGTTATTGCTGGTCTTAATGTGATGCGTATCATCAACGAGCCAACAGCAGCTGCAA 88384 Query 451440 TAGCATATGGACT----AGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTT 451495 | || ||||| || | ||| | || | | || || || | | | ||| Sbjct 88385 TTGCCTATGGTCTTGACAAGAAGGCTACCAGTGTC-GGTGAGAAGAACGTGCTTATCTTT 88443 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAA 451555 || | ||||| || ||| |||| ||| | ||| | ||||| || || | ||||| Sbjct 88444 GACCTCGGTGGTGGCACTTTTGATGTCTCTCTCCTTACCATTGAGGAGGGTATTTTTGAG 88503 Query 451556 GTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| || |||||| ||||| || || || || || |||| || Sbjct 88504 GTCAAGGCCACAGCTGGTGACACTCACCTTGGTGGGGAGGACTTTGACAA 88553 >SEQ37921 Length=51049 Score = 95.1 bits (104), Expect = 5e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 391056 ATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAAC 391115 ||||| || || ||| | ||||| || || || |||||||| || || ||||| | | Sbjct 46636 ATTTTTGTCAAGACATTAACTGGAAAGACCATCACTCTTGAGGTGGAGAGCTCTGACACC 46577 Query 391116 ATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGT 391175 ||||| | | || || || || || ||||| ||||||||||| ||||| || | Sbjct 46576 ATTGATAATGTGAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCAGATCAGCAGAGG 46517 Query 391176 TTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGAT 391235 | || || ||||||| ||||| || ||||| | || ||||| |||||||| || | Sbjct 46516 CTTATCTTTGCAGGGAAGCAACTGGAGGATGGGCGTACCTTGGCAGATTATAACATCCAA 46457 Query 391236 AAGGATGCAACACTTCA 391252 || || | || ||||| Sbjct 46456 AAAGAATCCACTCTTCA 46440 >seq220121 Length=379296 Score = 91.5 bits (100), Expect = 6e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || | ||||| || || ||||||||||| || || || Sbjct 17224 ATGCAGATTTTTGTCAAGACGTTAACTGGAAAGACCATTACTCTTGAGGTGGAGAGCTCC 17283 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || ||| || || || ||||| ||||||||||||||||| Sbjct 17284 GACACCATCGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGAATTCCTCCTGATCAG 17343 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || ||||||| || || || ||||| | || ||||| |||||||| Sbjct 17344 CAGAGGCTTATCTTTGCAGGGAAGCAGCTGGAGGATGGGCGTACCTTGGCAGATTATAAC 17403 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || | || ||||| Sbjct 17404 ATCCAAAAAGAATCCACTCTTCA 17426 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || ||||| ||||| || || || |||||||| || || || Sbjct 16996 ATGCAGATATTTGTCAAGACACTAACTGGAAAGACCATCACTCTTGAAGTGGAGAGCTCC 17055 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || || || ||||||||||| || || ||||| || Sbjct 17056 GACACCATTGATAATGTGAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCTGACCAG 17115 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || || ||||| | || ||||||||||| ||| Sbjct 17116 CAGAGGCTCATCTTTGCTGGAAAGCAGCTCGAGGATGGGCGTACATTGGCGGATTACAAT 17175 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || |||||||| || Sbjct 17176 ATCCAGAAGGAGTCTACTCTTCACTTGGT 17204 >seq240551 Length=99239 Score = 84.2 bits (92), Expect = 9e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || ||||| ||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 22590 GCTGTGATCACAGTTCCAGCTTACTTCAATGATGCCCAGCGGCAGGCAACCAAGGATGCT 22531 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | |||||||| | |||| | | || || || ||||| || || |||||||| Sbjct 22530 GGTCGAATTGCTGGACTTGATGTCCAAAGGATCATCAACGAACCAACTGCTGCTGCTCTG 22471 Query 451442 GCATATGGA 451450 | |||||| Sbjct 22470 TCTTATGGA 22462 >seq218049 Length=338111 Score = 84.2 bits (92), Expect = 9e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || | || ||||| || || || || ||||| ||||| |||||| Sbjct 174763 ATGCAGATCTTTGTGAAGATCCTCACTGGCAAGACCATCACACTTGAGGTTGAGTCATCT 174822 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 | | || || | | || |||| || ||||||||||| |||| || || ||||| Sbjct 174823 AACACGATCGACAATGTCAAGGAAAAGATACAAGATAAGGAGGGAAACCCACCAGATCAG 174882 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | || || || || || || || |||| | || ||||| ||| Sbjct 174883 CAGCGGCTCATCTTTGCTGGCAAGCAGCTCGAGGACGGGCGAACACTTGCTGATTACAAT 174942 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || || ||||| | || || ||||| || Sbjct 174943 ATCGAGAAGGAATCCACCCTCCACTTGGT 174971 >seq172622 Length=352381 Score = 84.2 bits (92), Expect = 9e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 |||||||| || ||||| ||||| ||||| || |||| | || | | || Sbjct 97000 GTTCTTACCAAGATGAAGGAAACTGCAGAGGCTTACCTTGGCAAGTCGGTCTCCAAGGCT 96941 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||| || || ||||||||||||||||| || || || || || || ||||| || Sbjct 96940 GTTATTACAGTCCCAGCTTATTTCAATGATGCCCAGCGTCAGGCCACCAAGGATGCTGGT 96881 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| || | || | | ||||| ||||| || || || || ||||| | Sbjct 96880 AGGATTGCTGGGTTGGAGGTGATGAGGATTATCAATGAGCCCACTGCTGCAGCTCTGTCG 96821 Query 451445 TATGGA 451450 |||||| Sbjct 96820 TATGGA 96815 >seq154107 Length=1498255 Score = 84.2 bits (92), Expect = 9e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||| ||||| ||||| ||||||||||| || |||| || || || ||||| Sbjct 406636 GCTGTCATTACCGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCT 406695 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || | ||||||||| | |||| | | || || |||||||| || || |||||||| Sbjct 406696 GGCCGTATTGCTGGACTTGATGTCCAAAGGATCATCAATGAACCAACTGCTGCTGCTCT 406754 >seq133562 Length=430236 Score = 84.2 bits (92), Expect = 9e-11 Identities = 130/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 |||||||| || ||||| ||||| ||||| || |||| | || | | || Sbjct 339722 GTTCTTACCAAGATGAAGGAAACTGCAGAGGCTTACCTTGGCAAGTCGGTCTCCAAGGCT 339781 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||| || || ||||||||||||||||| || || || || || || ||||| || Sbjct 339782 GTTATTACAGTCCCAGCTTATTTCAATGATGCTCAGCGTCAGGCCACCAAGGATGCTGGT 339841 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| || | || | | ||||| ||||| || || || || ||||| | Sbjct 339842 AGGATTGCTGGGTTGGAGGTGATGAGGATTATCAATGAGCCCACTGCCGCAGCTCTGTCG 339901 Query 451445 TATGGA 451450 |||||| Sbjct 339902 TATGGA 339907 >seq115148 Length=379920 Score = 84.2 bits (92), Expect = 9e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||| ||||| ||||| ||||||||||| || |||| || || || ||||| Sbjct 135631 GCTGTCATTACCGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCT 135690 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || | ||||||||| | |||| | | || || |||||||| || || |||||||| Sbjct 135691 GGCCGTATTGCTGGGCTTGATGTCCAAAGGATCATCAATGAACCAACTGCTGCTGCTCT 135749 >SEQ54043 Length=320892 Score = 84.2 bits (92), Expect = 9e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || ||||| ||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 117904 GCTGTGATCACAGTTCCAGCTTACTTCAATGATGCCCAGCGGCAGGCAACCAAGGATGCT 117963 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || | |||||||| | |||| | | || || || ||||| || || |||||||| Sbjct 117964 GGTCGAATTGCTGGACTTGATGTCCAAAGGATCATCAACGAACCAACTGCTGCTGCTCTG 118023 Query 451442 GCATATGGA 451450 | |||||| Sbjct 118024 TCTTATGGA 118032 >SEQ29207 Length=316728 Score = 84.2 bits (92), Expect = 9e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||| ||||| ||||| ||||||||||| || |||| || || || ||||| Sbjct 170988 GCTGTCATTACCGTTCCAGCTTACTTCAATGATGCTCAGAGGCAGGCCACCAAGGATGCT 170929 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || | ||||||||| | |||| | | || || |||||||| || || |||||||| Sbjct 170928 GGCCGTATTGCTGGACTTGATGTCCAAAGGATCATCAATGAACCAACTGCTGCTGCTCT 170870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1968644711333412