Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq217728 84.2 1e-11 >seq217728 Length=151490 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 26065 ACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAA 26124 ||| ||||| || ||||||||||||||||| || | ||||| |||||||| || || Sbjct 39214 ACCCTTTCTCTTGCCTCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAA 39155 Query 26125 CATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCT 26184 ||| ||||| | ||| | || ||| ||||| | |||| | | || | | | Sbjct 39154 CATAGGAACAATCCCATTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACG 39095 Query 26185 AATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGA 26244 ||||| |||| || || ||| ||||| ||||| |||| || | ||||| || Sbjct 39094 AATATTGTGAACAGAAACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTT 39035 Query 26245 AACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||||| | ||||| | ||||| ||| ||||||| Sbjct 39034 CAGAGTATCATAGATTCCCTCAATGCTGTCATCTTTCAT 38996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252178231081925