Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq191811 86.0 2e-12 seq155460 86.0 2e-12 seq146512 86.0 2e-12 seq137903 86.0 2e-12 seq116691 86.0 2e-12 SEQ92607 86.0 2e-12 SEQ67439 86.0 2e-12 SEQ49200 86.0 2e-12 seq46 86.0 2e-12 seq45 86.0 2e-12 seq44 86.0 2e-12 seq32 86.0 2e-12 seq31 86.0 2e-12 seq29 86.0 2e-12 seq28 86.0 2e-12 seq21 86.0 2e-12 seq19 86.0 2e-12 SEQ80478 84.2 8e-12 seq116128 82.4 3e-11 SEQ23555 82.4 3e-11 seq229453 80.6 1e-10 seq225772 80.6 1e-10 SEQ66816 80.6 1e-10 SEQ13418 80.6 1e-10 seq3 80.6 1e-10 >seq191811 Length=54987 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 27071 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 27012 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 27011 GCTCTACTCCGC 27000 >seq155460 Length=326586 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 89866 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 89807 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 89806 GCTCTACTCCGC 89795 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 139123 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 139182 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 139183 GCTCTACTCCGC 139194 >seq146512 Length=314749 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 87709 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 87650 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 87649 GCTCTACTCCGC 87638 >seq137903 Length=126999 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 48460 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 48519 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 48520 GCTCTACTCCGC 48531 >seq116691 Length=23607 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 4028 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 4087 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 4088 GCTCTACTCCGC 4099 >SEQ92607 Length=66014 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 45078 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 45019 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 45018 GCTCTACTCCGC 45007 >SEQ67439 Length=132017 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 124188 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 124247 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 124248 GCTCTACTCCGC 124259 >SEQ49200 Length=1276955 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 903912 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 903853 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 903852 GCTCTACTCCGC 903841 >seq46 Length=27807 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 13799 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 13858 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 13859 GCTCTACTCCGC 13870 >seq45 Length=28713 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 20948 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 21007 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 21008 GCTCTACTCCGC 21019 >seq44 Length=22956 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 12873 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 12932 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 12933 GCTCTACTCCGC 12944 >seq32 Length=23038 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 15210 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 15269 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 15270 GCTCTACTCCGC 15281 >seq31 Length=20809 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 12981 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 13040 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 13041 GCTCTACTCCGC 13052 >seq29 Length=60002 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 52174 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 52233 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 52234 GCTCTACTCCGC 52245 >seq28 Length=31828 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 23999 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 24058 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 24059 GCTCTACTCCGC 24070 >seq21 Length=38769 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 16880 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 16939 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 16940 GCTCTACTCCGC 16951 >seq19 Length=22941 Score = 86.0 bits (94), Expect = 2e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 15113 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 15172 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 15173 GCTCTACTCCGC 15184 >SEQ80478 Length=199075 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCT-GGCGAGCTACCGAAC 50170 ||||||| ||||| | ||||||| | |||| ||| ||||||||| || |||||||| ||| Sbjct 166377 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGGTGAGCTACCAAAC 166436 Query 50171 TGCTCTACTCCGC 50183 ||||||||||||| Sbjct 166437 TGCTCTACTCCGC 166449 >seq116128 Length=616283 Score = 82.4 bits (90), Expect = 3e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 11130 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 11189 Query 50172 GCTCTACTCC 50181 |||||||||| Sbjct 11190 GCTCTACTCC 11199 >SEQ23555 Length=22288 Score = 82.4 bits (90), Expect = 3e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| ||||||||| | |||||||| |||| Sbjct 21947 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 21888 Query 50172 GCTCTACTCC 50181 |||||||||| Sbjct 21887 GCTCTACTCC 21878 >seq229453 Length=524680 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| || |||||| | |||||||| |||| Sbjct 469618 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTAGGAGCCTCGTGAGCTACCAAACT 469559 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 469558 GCTCTACTCCGC 469547 >seq225772 Length=796621 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | |||| || | |||| ||| ||||||||| | |||||||| |||| Sbjct 546688 TGCGGAGACGGGAATCGAACTCGTGACCTCAAGGTTATGAGCCTCGTGAGCTACCAAACT 546747 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 546748 GCTCTACTCCGC 546759 >SEQ66816 Length=73014 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| ||| || |||||| | |||||||| |||| Sbjct 15444 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGGTTAGGAGCCTCGTGAGCTACCAAACT 15385 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 15384 GCTCTACTCCGC 15373 >SEQ13418 Length=178480 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | ||| ||| ||||||||| | |||||||| |||| Sbjct 83514 TGCGGAGACGGGAATCGAACCCGTGAACTCAAGGTTATGAGCCTAGTGAGCTACCAAACT 83573 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 83574 GCTCTACTCCGC 83585 >seq3 Length=57162 Score = 80.6 bits (88), Expect = 1e-10 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 50112 TGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAACT 50171 ||||||| ||||| | ||||||| | |||| || ||||||||| | |||||||| |||| Sbjct 42930 TGCGGAGACGGGAATCGAACCCGTGACCTCAAGTTTATGAGCCTCGTGAGCTACCAAACT 42989 Query 50172 GCTCTACTCCGC 50183 |||||||||||| Sbjct 42990 GCTCTACTCCGC 43001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181000579177818