Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27]
279,439 sequences; 15,344,693,583 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq234232 87.8 1e-12
seq215674 87.8 1e-12
>seq234232
Length=92786
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 41079 CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATG 41138
|||||||| || ||||| ||| | || ||||| |||||||| | |||| |||||||
Sbjct 54739 CAGTTTTATGTCGAGAATGGAGAATTATCCTGTCAGATGTATCAACGTTCAGCTGACATG 54798
Query 41139 GGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACAC 41198
|| || || || || || ||||| || ||| |||| || |||| ||||||||||||
Sbjct 54799 GGGCTTGGTGTACCATTCAACATTGCATCATATTCTCTTCTGACGTGTATGATTGCACAA 54858
Query 41199 GTT 41201
|||
Sbjct 54859 GTT 54861
>seq215674
Length=680519
Score = 87.8 bits (96), Expect = 1e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 41079 CAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATG 41138
|||||||| || ||||| ||| | || ||||| |||||||| | |||| |||||||
Sbjct 28416 CAGTTTTATGTCGAGAATGGAGAATTATCCTGTCAGATGTATCAACGTTCAGCTGACATG 28475
Query 41139 GGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACAC 41198
|| || || || || || ||||| || ||| |||| || |||| ||||||||||||
Sbjct 28476 GGGCTTGGTGTACCATTCAACATTGCATCATATTCTCTTCTGACGTGTATGATTGCACAA 28535
Query 41199 GTT 41201
|||
Sbjct 28536 GTT 28538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396102398881195
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |