Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq232474 93.3 3e-14 >seq232474 Length=955513 Score = 93.3 bits (102), Expect = 3e-14 Identities = 162/231 (70%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| |||||||| || || || || || || || | || || || || Sbjct 317954 ATGCAAATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTTGAGTCTTCC 317895 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| | ||| |||||| || || |||||||| || | || || | Sbjct 317894 GACACGATCGATAAT--GTCAAAGCGAAGATCCAGGACAAAGAGGGCATCCCCCCAGACC 317837 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAG-CTTGTCCGATTAC 27966 |||||||||| || |||||||| || ||| | || || | ||||| |||| | |||||| Sbjct 317836 AGCAACGGTTGATCTTTGCCGGCAAGCAACTTGAGGATGGACGCACTCTTG-CTGATTAC 317778 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||||||| |||| | || |||||| | ||| | ||||| ||| Sbjct 317777 AACATCCAAAAAGAATCCACTCTCCACTTGGTTCTCCGTCTCCGTGGTGGC 317727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354650452657953