Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20aestivum_20[genbank_20GCA_5F002220415.2_202017-07-27] 279,439 sequences; 15,344,693,583 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq217728 111 2e-19 seq105865 93.3 6e-14 seq105618 87.8 2e-12 >seq217728 Length=151490 Score = 111 bits (122), Expect = 2e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||||| ||| | || || | ||| | || | ||||| |||| ||| || Sbjct 39198 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCCA 39139 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || ||||||||||||||||| |||||| || ||| | || |||||||| || || Sbjct 39138 TTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACGAATATTGTGAACAGAA 39079 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || ||| ||| | ||| || |||| ||||| ||||| Sbjct 39078 ACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTTCAGAGTATCATAGATT 39019 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| || |||||||| ||||| | ||| |||||||| Sbjct 39018 CCCTCAATGCTGTCATCTTTCATGCAGATAAGGAAACAGCT 38978 >seq105865 Length=238993 Score = 93.3 bits (102), Expect = 6e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || |||||||||| ||| | || || | ||| | || | ||||| |||| ||| || Sbjct 96361 CCACCCTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCCA 96302 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || ||||| ||||||||||| ||||||||| ||| | || ||||| || || || Sbjct 96301 TTGGATGTCCCATTTGTTCCTCGAATATAACTCCCAGTAGCACGAATGTTGTGAACTGAG 96242 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || || ||||| || || ||| | ||| || || | ||||| ||||| Sbjct 96241 ACACCAATCCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTGAGAGTATCATAGATT 96182 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| || || ||||| ||||| | ||| |||||||| Sbjct 96181 CCCTCAATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 96141 >seq105618 Length=129425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || || ||||||| ||| | || || | ||| | || | ||||| |||| ||| || Sbjct 35594 CCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATTCCA 35535 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 || ||||||||||||||||| || ||||| ||| | || ||||| || || || Sbjct 35534 TTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACGAATGTTGTGAACAGAG 35475 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337 | || || ||||| | || || | | || | ||| || |||| ||||| ||||| Sbjct 35474 ACGCCAATCCCTCCAG-CAGATTTGCTGATGACAGCACATTCCTTCAGAGTATCATAGAT 35416 Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| || || ||||| ||||| | ||| |||||||| Sbjct 35415 TCCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 35374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692242330564960