Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq14 82.4 1e-10
seq13 82.4 1e-10
>seq14
Length=755408349
Score = 82.4 bits (90), Expect = 1e-10
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| ||||||||||| |||||||| | || | ||||| || || |||||
Sbjct 132512554 CAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 132512613
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || ||||| || ||||| || |||| ||| || || || ||||||
Sbjct 132512614 CCCGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAG 132512673
Query 33702 ATTCCTTCTACTGCA-GCAAAGGC 33724
|| || || || ||| || |||||
Sbjct 132512674 ATGCCCTCCAC-GCAGGCGAAGGC 132512696
>seq13
Length=727576108
Score = 82.4 bits (90), Expect = 1e-10
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| ||||||||||| |||||||| | || | ||||| || || |||||
Sbjct 164669891 CAGGCGAAGTCGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGG 164669950
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| ||||| || || ||||| || ||||| || |||| ||| || || || ||||||
Sbjct 164669951 CCCGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAG 164670010
Query 33702 ATTCCTTCTACTGCA-GCAAAGGC 33724
|| || || || ||| || |||||
Sbjct 164670011 ATGCCCTCGAC-GCAGGCGAAGGC 164670033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628643509775520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |