Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq13 104 2e-17 seq11 100 3e-16 seq12 98.7 1e-15 seq10 84.2 2e-11 >seq14 Length=755408349 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||| | || ||||||| || ||||| || || |||||||| || Sbjct 620702643 TGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCC 620702702 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| || || ||||| || |||||| ||||||| || ||||| || || Sbjct 620702703 GCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGG 620702762 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713 || ||||| || ||||| ||| | |||| || | | || | ||||| | || ||| Sbjct 620702763 GGAATGCCCTCCTTGTCC-TGAATCTTTGCCTTCACGTTGTCGATGGTGTCAGAGGACTC 620702821 Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | ||||||||||||| || || || || || ||||| Sbjct 620702822 AACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 620702872 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GC 139595 ||| || || | ||| | ||| ||||| | || |||||||| || ||||| ||||| || Sbjct 638037934 GCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAATCAGC 638037875 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | | ||| | | || ||||| || || |||||| |||| || || ||||| || || | Sbjct 638037874 T-AGTGTCCGCCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGCG 638037816 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || || || || || ||| ||| || | | || | |||||| | || ||| | Sbjct 638037815 GGATACCCTCCTTATCCTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGA 638037756 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | ||||||||||| | ||| || || || || ||||| Sbjct 638037755 CCTCAAGTGTGATGGTCTTGCCGGTGAGCGTCTTCACAAAAATCTGCAT 638037707 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | || | || | ||| | |||||||| || |||||||| ||||| Sbjct 638038164 TGGCCACCACGAAGGCGAAGCACCAGGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCT 638038105 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || ||||| || || ||||| ||||| ||| ||||||| || ||||| || || Sbjct 638038104 GCCAGTGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGG 638038045 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 638038044 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAAGATTCC 638037985 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | |||||||||||||| || || || || || ||||| Sbjct 638037984 ACCTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 638037935 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | ||| ||||| | || || |||||||| ||||| ||||| Sbjct 638076864 GCCACCACGGAGACGGAGAACCAAGTGCAGAGTGGATTCTTTTTGGATGTTGTAATCAGC 638076805 Query 139597 CATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | |||| || | || || || || || || ||| |||||| || ||||| || || | Sbjct 638076804 AAGAGTGCGTCCA-TCCTCAAGTTGCTTGCCGGCAAAGATCAACCGCTGCTGGTCTGGGG 638076746 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||| |||||||| ||| || ||| | | || | ||||||| | ||| | Sbjct 638076745 GGATGCCCTCTTTGTCCTGGATCTTCGCTTTGACATTATCGATCGTGTCGGAAGACTCAA 638076686 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||||||||| | || || || || |||||||| Sbjct 638076685 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 638076637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || |||||| |||| ||||| ||||| || || || ||||| || ||| Sbjct 620934538 TCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTG 620934597 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| ||| || | | || | ||||| | || ||| ||||||| ||| | Sbjct 620934598 TCCTGGATCTTTGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATG 620934657 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | || || ||||| || ||||| Sbjct 620934658 GTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 620934692 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | || | || ||||| | |||||||| || |||||||| ||||| Sbjct 639897703 TGGCCACCACGAAGGCGGAGCACCAAGTGGAGAGTAGACTCCTTCTGAATGTTGTAATCC 639897762 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | |||| || || ||||| || |||||| ||||||| || ||||| || || Sbjct 639897763 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGG 639897822 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 639897823 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAAGATTCC 639897882 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | ||||||||||| | || || || || |||||||| Sbjct 639897883 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 639897932 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || || || |||| || |||||||| || ||| Sbjct 620715587 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 620715646 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| |||||||| ||||| ||||| || ||||| ||| || || Sbjct 620715647 GCGAAGATGAGACGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 620715706 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | || ||| ||||| | ||| | ||||||||||||| || Sbjct 620715707 ACGTTGTCGATGGTGTCCGAGGACTCAACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 620715766 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 620715767 TTCACAAAGATCTGCAT 620715783 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || || || |||| || |||||||| || ||| Sbjct 620703502 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCA 620703561 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| ||||| ||||| || ||||| ||||| || ||||| ||| || || Sbjct 620703562 GCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTG 620703621 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | || ||| ||||||| ||| | ||||||||||| | || Sbjct 620703622 ACGTTGTCAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 620703681 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 620703682 TTCACAAAGATCTGCAT 620703698 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || |||||||| || |||||| |||| ||||| ||||| || || || ||||| || ||| Sbjct 620971719 TCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 620971778 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| ||| || | | || | ||||| | || ||| ||||||| || | Sbjct 620971779 TCCTGGATCTTTGCCTTCACATTGTCGATGGTGTCAGAGGACTCGACCTCAAGTGTGATG 620971838 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | || || ||||| || ||||| Sbjct 620971839 GTCTTGCCGGTAAGGGTCTTCACGAAGATCTGCAT 620971873 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || ||||||||||| |||||| |||| ||||| ||||| || || || ||||| || ||| Sbjct 655250097 TCCTCGAGCTGTTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTG 655250156 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| ||| || | | || | |||||| | || ||| ||||||| || | Sbjct 655250157 TCCTGGATCTTTGCCTTGACATTGTCAATTGTGTCAGAGGACTCGACCTCAAGTGTGATG 655250216 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||||| | || || || || || ||||| Sbjct 655250217 GTCTTCCCGGTGAGAGTCTTCACAAAGATCTGCAT 655250251 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || |||||||| || ||| ||||||| || ||||| || || || ||||| || || Sbjct 637986848 TCCTCAAGCTGTTTGCCTGCAAAGATCAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTA 637986789 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | |||||| | | ||| ||||| | ||| | Sbjct 637986788 TCCTGGATCTTGGCCTTCACATTGTCAATTGTGTCAGAAGACTCAACCTCGAGGGTGATG 637986729 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||||||||| || || ||||| || ||||| Sbjct 637986728 GTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 637986694 >seq13 Length=727576108 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||| | || ||||||| || ||||| || || |||||||| || Sbjct 643167483 TGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCC 643167542 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| || || ||||| |||||||| ||||||| || ||||| || || Sbjct 643167543 GCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCCGGG 643167602 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| |||||| || | | || | ||||| | || ||| Sbjct 643167603 GGAATGCCCTCCTTGTCCTGGATTTTCGCCTTCACATTGTCGATGGTGTCAGAGGACTCA 643167662 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | ||||||||||| | || || || || |||||||| Sbjct 643167663 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 643167712 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||| | || ||||||| || ||||| || |||||||| || || Sbjct 643789401 TGGCCACCACGGAGACGGAGCACCAAGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCC 643789460 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| || || ||||| ||||||||| |||| || || ||||| || || Sbjct 643789461 GCCAAGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGG 643789520 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | |||| Sbjct 643789521 GGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCAGATGACTCC 643789580 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | ||||||||||| | || || || ||||| ||||| Sbjct 643789581 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAATATCTGCAT 643789630 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || || || |||| || || ||||| || ||| Sbjct 643167744 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCA 643167803 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||| ||||||||||| || ||||| |||||||| ||||| ||| || || Sbjct 643167804 GCAAAGATGAGACGTTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTC 643167863 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | |||||| | || ||| ||||||| || | ||||||||||| | || Sbjct 643167864 ACATTGTCAATTGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTC 643167923 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 643167924 TTCACAAAAATCTGCAT 643167940 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| || || ||||| || || | |||| || ||| Sbjct 643789878 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCG 643789937 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || |||||| |||| ||||| ||||| || || || ||||| || ||||| | Sbjct 643789938 AGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 643789997 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || ||| || | | || | ||||| | || ||| ||||||| ||| | |||||| Sbjct 643789998 ATCTTTGCCTTGACATTGTCAATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTG 643790057 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || || || || || ||||| Sbjct 643790058 CCGGTGAGGGTCTTCACAAAGATCTGCAT 643790086 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || || || |||| || |||||||| Sbjct 643897495 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGGCCATCCTCGAGCTG 643897554 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || ||||| |||||| || ||||| || ||||| ||||| || ||||| ||| || Sbjct 643897555 CTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 643897614 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | ||||||| || ||| ||||||| ||| | ||||||||||| Sbjct 643897615 AGCCTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 643897674 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | || || || || || ||||| Sbjct 643897675 GAGGGTCTTCACAAAGATCTGCAT 643897698 Score = 82.4 bits (90), Expect = 8e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | || | || || |||| || ||||| || || ||||||||||| Sbjct 643772549 TGGCCACCACGGAGCCGGAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTTATAATCA 643772608 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| || || ||||| ||||||||| |||| || || ||||| || || Sbjct 643772609 GCCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCTGGT 643772668 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 643772669 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATCGTGTCCGAAGACTCA 643772728 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | || | |||||||| || | || || || || |||||||| Sbjct 643772729 ACCTCCAGAGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATTTGCAT 643772778 Score = 82.4 bits (90), Expect = 8e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | || ||||| || || ||||| ||||| | |||| || ||| Sbjct 643789650 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCG 643789709 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 ||||| || || ||| ||||||| || ||||| || || || ||||| || ||||| | Sbjct 643789710 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 643789769 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | ||||| | || ||| ||||| | ||| | |||||| Sbjct 643789770 ATCTTGGCCTTCACATTGTCAATGGTGTCTGAGGACTCAACCTCCAGGGTGATGGTCTTG 643789829 Query 139736 CCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || || || || || |||||| Sbjct 643789830 CCGGTGAGGGTCTTGACAAAGATCTGCATA 643789859 >seq11 Length=621432051 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | || | || | ||||| |||||||| || || ||||| || || Sbjct 54897064 TGGCCACCACGCAGGCGGAGCACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCT 54897123 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| || || ||||| || || ||| |||||||||| ||||| || || Sbjct 54897124 GCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCCGGG 54897183 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | || |||| Sbjct 54897184 GGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCCGAGGACTCC 54897243 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| | ||| | ||||||||||| | ||| || ||||| || ||||| Sbjct 54897244 ACCTCCAGGGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAAATCTGCAT 54897293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || |||||| |||| ||||| ||||| || ||||| ||||| || ||| Sbjct 90159369 TCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTG 90159310 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | |||||| | | ||||||||||| ||| | Sbjct 90159309 TCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGAAGACTCCACCTCAAGGGTGATG 90159250 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||||||| || || || || ||||| Sbjct 90159249 GTCTTGCCAGTCAACGTCTTGACAAAGATCTGCAT 90159215 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || || | || || || || ||||| Sbjct 90159190 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTG 90159131 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || ||||| |||| ||||| ||||| || ||||| ||||| || ||||| ||| || Sbjct 90159130 CTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 90159071 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | |||||| | | ||||||||||| ||| | |||||||| || Sbjct 90159070 GGCCTTAACGTTGTCGATTGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCTGT 90159011 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| || || || || || ||||| Sbjct 90159010 CAATGTCTTCACAAAGATCTGCAT 90158987 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||| || || | || || ||| || ||||| || ||| Sbjct 80112324 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCA 80112383 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| || || || ||||| || ||||| ||||||| || Sbjct 80112384 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATTTTTGCCTTG 80112443 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | | ||||||||||| ||| | |||||||| ||||| || Sbjct 80112444 ACGTTGTCAATGGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCTGTCAATGTC 80112503 Query 139748 TTTACGAATATTTGCAT 139764 || || || || ||||| Sbjct 80112504 TTCACAAAGATCTGCAT 80112520 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 || || ||||| || |||||| ||||||| || ||||| || || || ||||| || ||| Sbjct 107015405 TCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 107015464 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | |||||||| | ||| ||||| | ||| | Sbjct 107015465 TCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCAACCTCCAGGGTGATG 107015524 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||||||||| | || || ||||| || ||||| Sbjct 107015525 GTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 107015559 >seq12 Length=703217322 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 139536 GGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGC 139595 ||||||| || | |||| || | |||| || || |||||||| ||||||||||| Sbjct 511296257 GGCCGCCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTTTGGATGTTATAATCTG 511296316 Query 139596 TCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 || || | | || || ||||| || || ||| |||| || | |||||||| |||| Sbjct 511296317 CCAAGGTACGCCCATCCTCCAGCTGCTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 511296376 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | || || || ||||| ||| ||| || | | || | ||||||| | ||||| Sbjct 511296377 GAATTCCCTCCTTGTCCTGGATCTTTGCCTTCACATTATCGATGGTGTCGGAGCTCTCCA 511296436 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||| || | ||||| || || ||||| || || || || ||||| Sbjct 511296437 CCTCAAGAGTAATGGTCTTTCCAGTTAACGTCTTGACAAAAATCTGCAT 511296485 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || ||||| || || ||||| || || | || || || |||||||| Sbjct 153870815 GTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCGAGCTG 153870756 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || ||||| |||| || || ||||| || ||||| ||||| || ||||| ||| || Sbjct 153870755 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 153870696 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | |||||| | | ||||||||||| ||| | |||||||| || Sbjct 153870695 GGCCTTGACATTATCGATTGTGTCAGACGACTCCACCTCAAGGGTGATGGTCTTGCCAGT 153870636 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| || || || || || ||||| Sbjct 153870635 CAATGTCTTCACAAAGATCTGCAT 153870612 >seq10 Length=712180895 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 ||||| || || | ||| | || | ||| | || ||||| || || ||||| || || Sbjct 104923087 TGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCA 104923146 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 | |||| ||| |||||||| ||||||||| |||| || || ||||| || || Sbjct 104923147 GCGAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCAAAGATGAGGCGCTGCTGGTCCGGT 104923206 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || ||||| || ||||| ||| || || | | || | ||||| | | ||| Sbjct 104923207 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCAGATGACTCG 104923266 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| | || | ||||||||||| | || || ||||| || |||||| Sbjct 104923267 ACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATA 104923317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495139249892800