Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq14 86.0 6e-12 >seq14 Length=755408349 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || | ||| | ||| || || | || ||||||||||| ||||||||||| Sbjct 638076864 GCCACCACGGAGACGGAGAACCAAGTGCAGAGTGGATTCTTTTTGGATGTTGTAATCAGC 638076805 Query 143017 CATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | |||| || | || || ||||| || || ||| |||||| || ||||| || || | Sbjct 638076804 AAGAGTGCGTCCA-TCCTCAAGTTGCTTGCCGGCAAAGATCAACCGCTGCTGGTCTGGGG 638076746 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTA 143135 | ||||| |||||||| || || ||| | | || | |||||| | | || | Sbjct 638076745 GGATGCCCTCTTTGTCCTGGATCTTCGCTTTGACATTATCGATCGTGTCGGAAGACTCAA 638076686 Query 143136 CTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | || | || | ||||||||||| | || || || || |||||||| Sbjct 638076685 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATTTGCAT 638076637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506069236430880