Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq129631 87.8 3e-12 >seq129631 Length=630463 Score = 87.8 bits (96), Expect = 3e-12 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 272875 TGGGCCCAGCAGGACTTGAACCTGCGACCAAGCGATTATGAGTCGCCTGCTCTAACCAAC 272934 ||| || || ||| ||||||| |||||||||||||||||||||||||||||| ||| || Sbjct 130076 TGGCCCTTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTGACC-AC 130134 Query 272935 TGAGCTATAGGCCCTTTTTATTTAT 272959 ||||||| ||| || | ||||||| Sbjct 130135 TGAGCTAAAGGGCC-ATATATTTAT 130158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895268745384160