Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq12 82.4 6e-11
>seq12
Length=703217322
Score = 82.4 bits (90), Expect = 6e-11
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC-GCT 15195
|||||||||| | | ||| | || ||||| || || ||||| ||||||||||| ||
Sbjct 511296943 CCACCTCTCAGGCGGAGAACAAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAATCAGC- 511297001
Query 15196 TAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTT 15253
||| ||| | || |||| || |||||||| |||| | | ||||||||
Sbjct 511297002 --CAATGTTCGGCCATCCTCTAGCTGCTTGCCAGCAAATATGAGCCTCTGTTGGTCCGGA 511297059
Query 15254 GGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313
||||| || || ||||| ||| ||| || ||| | || |||||||| | | ||
Sbjct 511297060 GGAATGCCCTCCTTGTCCTGAATCTTGGCTTTAACATTGTCAATGGTATCTGAACTCTCG 511297119
Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || | || || || || ||||| || || || ||||| || |||||
Sbjct 511297120 ACCTCAAGAGTGATAGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 511297169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361520913725094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |