Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_005066.1
Length=164018
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 161 1e-34
>seq129631
Length=630463
Score = 161 bits (178), Expect = 1e-34
Identities = 300/438 (68%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 135792 TTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCCCTTATTG 135851
|||||||| ||||| | |||||||||||||| | | || ||||| | || ||||
Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559
Query 135852 TTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCC 135911
|| ||||| || | | | |||||| |||| |||||| ||||||||| | | ||| ||
Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499
Query 135912 GCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAG 135971
||||| || | || || ||||| || || || || || || | || || ||||| |
Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439
Query 135972 AATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGA 136031
|| || ||| || |||||| |||| |||| | ||| | |||| || |||
Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379
Query 136032 ATCATACCAGCGTTGATACCGATGCCAGCACGCTTGCTAATATACTTGATGATTGCATTT 136091
|| ||||||||| || || || || || || | || ||| || | |||||| |
Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319
Query 136092 GCTGTTTCGTTGAT-GCCCTGCAATGAGTCATCACTTTCAATCACCACGCACGAACTAAA 136150
| ||| | || || | | ||| | || ||| |||||| | ||| || ||||||||
Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACTAAA 522260
Query 136151 TTGTCGTGTTGGAGTACGCACACCCGCCATAATCGGAGTAGGCAGAGAGATTTGCTTATT 136210
||| || ||||| || | || || | ||||||||| || || ||||| |||| | |
Sbjct 522259 TTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGT 522200
Query 136211 CGCAACAGCATTATAAAA 136228
| || |||||||||||
Sbjct 522199 GGAAATTGCATTATAAAA 522182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 523751412197920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |