Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-13 >seq13 Length=727576108 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCATCGTC 43971 ||||| || || | | |||||| ||||| || ||||| | || || | |||| || Sbjct 657438306 ACCAAGTGGAGGGCGGACTCTTTCTGAATGTTGTAATCAGCAAAAGTGTGTC-CATCCTC 657438248 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | ||| || || |||||||||||||| |||||||| | || | || || || ||| Sbjct 657438247 AAGTTGCTTGCCGGCAAATATCAACCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 657438188 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || || |||||| | ||| ||||| | | ||| || |||| || || || || Sbjct 657438187 GATCTTCGCTTTGACATTGTCAATCGTATCGGAAGACTCAACCTCGAGGGTGATGGTCTT 657438128 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||| | ||||||||||| ||||||||| Sbjct 657438127 GCCGGTGAGGGTCTTCACAAAGATTTGCATG 657438097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354132766655832