Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_005083.2
Length=244834
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 113 7e-20
>seq129631
Length=630463
Score = 113 bits (124), Expect = 7e-20
Identities = 283/425 (67%), Gaps = 10/425 (2%)
Strand=Plus/Plus
Query 147119 CTTTTATAACGCTGTTTCAACTCAAAAACTTTCGCTACCTACACCGATTATGGCAGGCGT 147178
||||||||| || |||| ||| ||| | || ||||| |||||||||||| |||| ||
Sbjct 522181 CTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGAGT 522240
Query 147179 TCGTACCCCGACACGTCAATTTAGCTCGTGTGTGAAAATCGAATCTGGCGACTCGCTGCG 147238
| || || || ||||||||||| || |||||| ||| |||| || || |
Sbjct 522241 AAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTAAA 522300
Query 147239 TTCGATCAACAAGGTATCTGAAGCTATCGTTGATTACATTAGTAAACGTGCGGGTATTGG 147298
|| || || | || || || || | || || | |||| || || || ||
Sbjct 522301 CTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATAGG 522360
Query 147299 CGTAAACGGTGGTGCAATTCGAGCAG-AGG--GTTCGGTTGTACGTGCGGGTGAA--ATT 147353
| | |||| |||| ||||||||| ||| || | | | || | ||| |||
Sbjct 522361 CATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATG---GAGAAGCATT 522417
Query 147354 CGTCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTCT 147413
||| || || |||||||| | |||||||| || | || || ||||| ||||||
Sbjct 522418 --TCATACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCT 522475
Query 147414 CAAGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGTA 147473
|||||||| || | || || || || ||| | |||||| || ||||| ||||| |
Sbjct 522476 CAAGGTGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATT 522535
Query 147474 GAAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCTT 147533
||||| | | ||| | || || || | ||| ||||||| || | | |||||||||
Sbjct 522536 GAAAATTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTT 522595
Query 147534 GACTA 147538
|| ||
Sbjct 522596 GATTA 522600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 781880515664160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |