Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_006949.1
Length=46900
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 114 4e-21
>seq129631
Length=630463
Score = 114 bits (126), Expect = 4e-21
Identities = 227/336 (68%), Gaps = 0/336 (0%)
Strand=Plus/Minus
Query 32908 CATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTGTCCACT 32967
||||||||| || || | || | ||| || | ||| || || | || | | ||| |
Sbjct 140987 CATTTGCATCGTACCGCCAATGTTAACTATAATTTCTGTTGTATAACGTTCAAGACCATT 140928
Query 32968 TTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG 33027
|||||| ||||||||||| || | | ||||||| ||| || | ||| |||||||
Sbjct 140927 TTGGTCTTGCCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCT 140868
Query 33028 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCACTCCGT 33087
|| ||| || | |||||||| |||| ||| || | || | | ||||| || ||
Sbjct 140867 CAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGT 140808
Query 33088 CTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATTGTCAG 33147
| ||| || | || ||||||||||||||| ||| | ||||| || || | |||||
Sbjct 140807 TTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCAT 140748
Query 33148 GTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTGTCCAACCCGACA 33207
|| | | || | || ||| || | |||||| || ||||| || | |||
Sbjct 140747 ATTTACTACTGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTAAGTGACC 140688
Query 33208 AAGGATAATCACCTTATTTACGCCTCTGCTTGCCAT 33243
|| | || || |||||||| ||||| ||||||||
Sbjct 140687 AATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149692828734696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |