Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq129631 114 4e-21 >seq129631 Length=630463 Score = 114 bits (126), Expect = 4e-21 Identities = 227/336 (68%), Gaps = 0/336 (0%) Strand=Plus/Minus Query 32908 CATTTGCATGGTTCCACTAACGCCAACGATGACTTCGGTAGTGAACCGATTCTGTCCACT 32967 ||||||||| || || | || | ||| || | ||| || || | || | | ||| | Sbjct 140987 CATTTGCATCGTACCGCCAATGTTAACTATAATTTCTGTTGTATAACGTTCAAGACCATT 140928 Query 32968 TTGGTCCTGCCATTTTCTTGTCCGCAATTTGCCTTCAAGATAAACCTCAGAGCCTTTTCG 33027 |||||| ||||||||||| || | | ||||||| ||| || | ||| ||||||| Sbjct 140927 TTGGTCTTGCCATTTTCTAGTTTGAAGGGATCCTTCAATATATACTTGAGAACCTTTTCT 140868 Query 33028 CAGATACTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATCACCACACGGTGCCACTCCGT 33087 || ||| || | |||||||| |||| ||| || | || | | ||||| || || Sbjct 140867 CAAATATTCTCCAGCAATTTCAGCCAATTTTCCAAATAATACTATTCTATGCCATTCTGT 140808 Query 33088 CTGCTCCTTTTGCTCGCCAGTATTTTTATCTCGCCATTGTTCTGACGTAGCTATTGTCAG 33147 | ||| || | || ||||||||||||||| ||| | ||||| || || | ||||| Sbjct 140807 TTTCTCTTTATTTTCACCAGTATTTTTATCTTTCCAGTTCTCTGAAGTTGCAAGTGTCAT 140748 Query 33148 GTTAGCGAACGCTGTTCCTGATGGTGAGTATCTAACTTCCGGGTCTTGTCCAACCCGACA 33207 || | | || | || ||| || | |||||| || ||||| || | ||| Sbjct 140747 ATTTACTACTGCATTACCATTTGGCATATAACGAACTTCAGGATCTTGGCCTAAGTGACC 140688 Query 33208 AAGGATAATCACCTTATTTACGCCTCTGCTTGCCAT 33243 || | || || |||||||| ||||| |||||||| Sbjct 140687 AATTAAGATTACTTTATTTACACCTCTACTTGCCAT 140652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149692828734696