Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 86.0 7e-12
>seq129631
Length=630463
Score = 86.0 bits (94), Expect = 7e-12
Identities = 182/270 (67%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985
||||||||||||||||| || | || ||| | |||| || ||| || ||| |
Sbjct 398044 CCATGTGTTAAATGACCTCCATGAGATAATTTCATTCCTAATATTGTATCACCAGGATTT 398103
Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045
||||| || |||||||| || || || || || ||||| ||||| || || ||
Sbjct 398104 AGCAATGCGGTATAAACAGCAAAATTAGCTTGAGATCCTGAATGCGGTTGCACATTAGCA 398163
Query 7046 AAATTGCAAC--TAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGG 7103
||| || | | || || | ||| || || | |||||| | || || | |||
Sbjct 398164 TAAT--CAGCGTTGAAAAGCTTTTTTGCTCGATTAATTGCTAATTTTTCTACAATATCTA 398221
Query 7104 CTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAA 7163
| | | ||||||| || || || ||||| | ||||| || || ||||| ||||| || |
Sbjct 398222 CGTATTCACAACCACCATAGTAACGTTTTTCAGGATAACCTTCTGCATATTTGTTCGTTA 398281
Query 7164 AAATAGAACCTTGCGCTTTCATAACATCAT 7193
| |||||||| || | ||| |||| ||
Sbjct 398282 ATTGTGAACCTTGTGCATACATGACATAAT 398311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 552322052052720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |