Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq129631 86.0 7e-12 >seq129631 Length=630463 Score = 86.0 bits (94), Expect = 7e-12 Identities = 182/270 (67%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||||||||||||||| || | || ||| | |||| || ||| || ||| | Sbjct 398044 CCATGTGTTAAATGACCTCCATGAGATAATTTCATTCCTAATATTGTATCACCAGGATTT 398103 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 ||||| || |||||||| || || || || || ||||| ||||| || || || Sbjct 398104 AGCAATGCGGTATAAACAGCAAAATTAGCTTGAGATCCTGAATGCGGTTGCACATTAGCA 398163 Query 7046 AAATTGCAAC--TAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGG 7103 ||| || | | || || | ||| || || | |||||| | || || | ||| Sbjct 398164 TAAT--CAGCGTTGAAAAGCTTTTTTGCTCGATTAATTGCTAATTTTTCTACAATATCTA 398221 Query 7104 CTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAA 7163 | | | ||||||| || || || ||||| | ||||| || || ||||| ||||| || | Sbjct 398222 CGTATTCACAACCACCATAGTAACGTTTTTCAGGATAACCTTCTGCATATTTGTTCGTTA 398281 Query 7164 AAATAGAACCTTGCGCTTTCATAACATCAT 7193 | |||||||| || | ||| |||| || Sbjct 398282 ATTGTGAACCTTGTGCATACATGACATAAT 398311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552322052052720