Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 4e-13 >seq14 Length=755408349 Score = 91.5 bits (100), Expect = 4e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||| || || ||| ||||| |||| ||| || || ||| | |||||| | || Sbjct 35287791 ATGAAAGATGACAGCATTGAGGGAATCTATGATACTCTGAAGGAATGTGCTGTCATAAGT 35287732 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATT 363741 || ||| || ||||||||||| || | |||||| ||||||| || || ||| Sbjct 35287731 AAATCTGCTGGAGGAATTGGTGTTTCTGTTCACAATATTCGTGCTATTGGGAGCTATATT 35287672 Query 363742 CGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 || || ||| ||| || |||||| | ||||| ||| | ||||| || | ||||| Sbjct 35287671 CGAGGAACAAATGGAACATCCAATGGGATTGTTCCTATGTTACGTGTCTTCAATGATACT 35287612 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 || | || || || || |||||||| ||| | || || |||| Sbjct 35287611 GCTCGTTATGTAGATCAAGGTGGAGGCAAGAGAAAGGGTGCGT 35287569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300863178822788