Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq14 107 2e-18
seq13 95.1 2e-14
>seq14
Length=755408349
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
||| || ||||||| || | ||| || | ||| | || | ||||| |||| ||| ||
Sbjct 35287588 TCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATCCC 35287647
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||||||||| ||||| || ||| |||||||| ||| | ||||||||||| || ||
Sbjct 35287648 ATTGGATGTTCCATTTGTTCCTCGAATATAGCTCCCAATAGCACGAATATTGTGAACAGA 35287707
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
| ||| ||||| || || |||| || | || ||| || | |||||||||||
Sbjct 35287708 AACACCAATTCCTCCAGCAGATTTACTTATGACAGCACATTCCTTCAGAGTATCATAGAT 35287767
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447
||||| || || ||||| ||||| | || ||||||||
Sbjct 35287768 TCCCTCAATGCTGTCATCTTTCATGCAGATAAGGAAACAGCT 35287809
>seq13
Length=727576108
Score = 95.1 bits (104), Expect = 2e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
||| || ||||||| || | ||| || | ||| | || | ||||| |||| ||| ||
Sbjct 79584464 TCCACCTTGATCTACATAACGAGCAGTATCATTGAAGACACGTAACATAGGAACAATTCC 79584523
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||||||||| ||||| || ||| ||| || || ||| | |||||||| || || ||
Sbjct 79584524 ATTGGATGTTCCATTTGTTCCTCGGATGTAACTCCCAGTAGCACGAATGTTGTGAACAGA 79584583
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405
| || || || || || ||| ||| | || ||| || | |||||||||||
Sbjct 79584584 GACGCCAATCCCTCCAGCAGATTTGCTGATGACAGCACATTCCTTCAGAGTATCATAGAT 79584643
Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCT 63447
||||| || |||||||| ||||| | || ||||||||
Sbjct 79584644 TCCCTCGATGCTATCATCTTTCATGCAGATAAGGAAACAGCT 79584685
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632450799066400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |