Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_009821.1 Length=164270 Score E Sequences producing significant alignments: (Bits) Value seq129631 156 4e-33 >seq129631 Length=630463 Score = 156 bits (172), Expect = 4e-33 Identities = 299/438 (68%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 135799 TTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACCCCCTTATTG 135858 |||||||| ||||| | || |||||||| || | | || ||||| | || |||| Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 135859 TTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCC 135918 || ||||| || | | | |||||| |||| |||||| ||||||||| | | ||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 135919 GCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAG 135978 ||||| || | || || ||||| || || || || || || | || || ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 135979 AATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGA 136038 || || ||| || |||||| |||| |||| | ||| | |||| || ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 136039 ATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTT 136098 || |||||||| || || || || || || | || ||| || | |||||| | Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 136099 GCTGTTTCGTTGAT-GCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAA 136157 | ||| | || || | | ||| | || ||| |||||| | |||||| |||||||| Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACTAAA 522260 Query 136158 TTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCAGAGAGATTTGCTTATT 136217 ||| || ||||| || | || |||| ||||||||| || || ||||| |||| | | Sbjct 522259 TTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGT 522200 Query 136218 CGCAACAGCATTATAAAA 136235 | || ||||||||||| Sbjct 522199 GGAAATTGCATTATAAAA 522182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524556308927200