Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_009821.1
Length=164270
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 156 4e-33
>seq129631
Length=630463
Score = 156 bits (172), Expect = 4e-33
Identities = 299/438 (68%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 135799 TTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACCCCCTTATTG 135858
|||||||| ||||| | || |||||||| || | | || ||||| | || ||||
Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559
Query 135859 TTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTCGCC 135918
|| ||||| || | | | |||||| |||| |||||| ||||||||| | | ||| ||
Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499
Query 135919 GCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTCCAG 135978
||||| || | || || ||||| || || || || || || | || || ||||| |
Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439
Query 135979 AATGGGATAACGCCAGTATGACGAACTTCACCATGCCCGATCTTAGATCCTTCCGCGCGA 136038
|| || ||| || |||||| |||| |||| | ||| | |||| || |||
Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379
Query 136039 ATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATGATTGCATTT 136098
|| |||||||| || || || || || || | || ||| || | |||||| |
Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319
Query 136099 GCTGTTTCGTTGAT-GCCCTGCAATGAGTCATCACTTTCAATCACCACACACGAACTAAA 136157
| ||| | || || | | ||| | || ||| |||||| | |||||| ||||||||
Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTA-TCTGCACATTCAATTAACACACAAGAACTAAA 522260
Query 136158 TTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGCAGAGAGATTTGCTTATT 136217
||| || ||||| || | || |||| ||||||||| || || ||||| |||| | |
Sbjct 522259 TTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGT 522200
Query 136218 CGCAACAGCATTATAAAA 136235
| || |||||||||||
Sbjct 522199 GGAAATTGCATTATAAAA 522182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524556308927200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |