Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq129631 152 6e-32 >seq129631 Length=630463 Score = 152 bits (168), Expect = 6e-32 Identities = 266/386 (69%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 141949 TAGTCCATATGACGAATACGGTTCTCATCGACACCTTTGTTGTTTTTCAAAACGAGCAGA 142008 || || | |||||| | | || || || | ||| | || ||||| ||||| | | | Sbjct 522600 TAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAA 522541 Query 142009 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCA 142068 ||||||| ||| | |||||| || || ||| || |||| || || || || | | |||| Sbjct 522540 TTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCA 522481 Query 142069 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTA 142128 ||||| ||||| ||||| || || | ||||| ||||| | || |||||| |||||| Sbjct 522480 CCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTA 522421 Query 142129 TGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTGATA 142188 || |||| || | | ||| || ||| ||| ||||| |||| |||| || Sbjct 522420 TGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATG 522361 Query 142189 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTGGCAGTTTTGTTAATAGAT 142248 || || ||||| |||| ||||| |||| | |||| | | || |||||||| Sbjct 522360 CCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAATAGAG 522301 Query 142249 TTCAGCGAGTCGCCTGC---TTCAATAACCACACAAGAACTAAATTGACGAGTTGGAGTA 142305 || | | | |||| |||||| | ||||||||||||||||||||||||||| || Sbjct 522300 TTTA---AATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTT 522244 Query 142306 CGTGCACCAGCCATAATAGGAGTAGG 142331 | | | || | |||||| || || || Sbjct 522243 CTTACTCCTGACATAATCGGTGTGGG 522218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544528607531120