Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_011357.1
Length=62147
Score E
Sequences producing significant alignments: (Bits) Value
seq34805 114 5e-21
seq129631 102 3e-17
>seq34805
Length=751
Score = 114 bits (126), Expect = 5e-21
Identities = 217/316 (69%), Gaps = 4/316 (1%)
Strand=Plus/Minus
Query 111 TTTTTACCAGTTTCGCCATCGCAATAGTGGCGTACACATCAGCCATCGCATCGTGGGCGT 170
|||||| | ||| |||| |||| || || || ||||| | | ||||| || || |
Sbjct 618 TTTTTATTAATTTTGCCAATTCAATTGTAGCATATACATCCGATGTAGCATCATGAGCAT 559
Query 171 TGCTATGTTCAATACCATTCGCTTTGGTTAAATGCTCAAGGC--GAAAGCTCGGTAGACC 228
| | |||| ||| ||| ||||| ||||||| || || | |||| | | || ||
Sbjct 558 TACAATGTGATATATTATTTGCTTTTGTTAAAT-CTGAAAGTTTGAAAACAGGTGAG-CC 501
Query 229 GTCATCATTTTCAGGCCAGTTTATTCCTTCCGGGCGCAGGGCATAGCAGGCACGCATAAC 288
||||||| |||||| ||||| || | || | || | ||| || || | | ||
Sbjct 500 AAATTCATTTTTAGGCCATTTTATACCATTTGGTCTCAAAGAATAACATGCTCTAACAAT 441
Query 289 ATCCAGTAAATCCCAGCGCGAGTTATCATGCTGCCAGCTCCAGGCGTAAGGATCGTAGAA 348
|| || ||||||||||| ||||| | || | ||| ||||| | |||||||| | ||
Sbjct 440 ATTTAGCAAATCCCAGCGAGAGTTGTTATTTTTCCAACTCCACTCATAAGGATCTAAAAA 381
Query 349 ATTACGATAAAAAACGTTGCGTGTGACTTCGTCGTCGAAACGCACATTGTTGTAGCCCAG 408
|||||||||||| | ||| | ||| | ||| || || |||| | ||| || || || |
Sbjct 380 ATTACGATAAAATATGTTTCTTGTAATTTCATCATCAAAACAAATATTATTATAACCTAT 321
Query 409 AATACAGGTCTTCGGT 424
||||| || || |||
Sbjct 320 TATACAAGTATTAGGT 305
>seq129631
Length=630463
Score = 102 bits (112), Expect = 3e-17
Identities = 64/69 (93%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 24380 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAAT 24439
||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||
Sbjct 130148 GGCCCTTTAGCTCAGTGGTCAGAGCAGGCGACTCATAATCGCTTGGTCGCTGGTTCAAAT 130089
Query 24440 CCAGCAAGG 24448
|||||||||
Sbjct 130088 CCAGCAAGG 130080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 198396822582972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |