Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_012741.1 Length=171451 Score E Sequences producing significant alignments: (Bits) Value seq129631 147 2e-30 >seq129631 Length=630463 Score = 147 bits (162), Expect = 2e-30 Identities = 265/386 (69%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 143017 TAGTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGA 143076 || || | |||||| | | ||||| || | ||| | || ||||| | ||| | | | Sbjct 522600 TAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAA 522541 Query 143077 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCA 143136 ||||||| ||| | |||||| || || ||| || |||| || || || || | | |||| Sbjct 522540 TTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCA 522481 Query 143137 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCAGTA 143196 ||||| ||||| ||||| || || | ||||| ||||| | || |||||| || ||| Sbjct 522480 CCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTA 522421 Query 143197 TGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTAATA 143256 || |||| || | | ||| || ||| ||| ||||| |||| ||||||| Sbjct 522420 TGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATG 522361 Query 143257 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAATAGAT 143316 || || ||||| |||| ||||| |||| | |||| | | || |||||||| Sbjct 522360 CCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAATAGAG 522301 Query 143317 TTCAGTGAGTCACCTGC---TTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGTA 143373 || | | | | |||| |||||| | |||||||||||||||||||| ||||| || Sbjct 522300 TTTA---AATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTT 522244 Query 143374 CGTGCACCAGCCATAATAGGAGTAGG 143399 | | | || | |||||| || || || Sbjct 522243 CTTACTCCTGACATAATCGGTGTGGG 522218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547492671677040