Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_012741.1
Length=171451
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 147 2e-30
>seq129631
Length=630463
Score = 147 bits (162), Expect = 2e-30
Identities = 265/386 (69%), Gaps = 6/386 (2%)
Strand=Plus/Minus
Query 143017 TAGTCCATATGACGAATACGGTTTTCATCGACACCTTTGTTGTTTTTCAGAACGAGCAGA 143076
|| || | |||||| | | ||||| || | ||| | || ||||| | ||| | | |
Sbjct 522600 TAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAA 522541
Query 143077 TTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCA 143136
||||||| ||| | |||||| || || ||| || |||| || || || || | | ||||
Sbjct 522540 TTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCA 522481
Query 143137 CCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAATGGAATAACACCAGTA 143196
||||| ||||| ||||| || || | ||||| ||||| | || |||||| || |||
Sbjct 522480 CCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTA 522421
Query 143197 TGTTTGACTTCACCCATGCCAATACGAGAACCTTCAGCACGAATCATACCAACGTTAATA 143256
|| |||| || | | ||| || ||| ||| ||||| |||| |||||||
Sbjct 522420 TGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATG 522361
Query 143257 CCAATACCTGCACGTTTAGAAATGTATTCAATTATTGAGTTTGCAGTTTTGTTAATAGAT 143316
|| || ||||| |||| ||||| |||| | |||| | | || ||||||||
Sbjct 522360 CCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAATAGAG 522301
Query 143317 TTCAGTGAGTCACCTGC---TTCAATAACAACACAAGAACTAAATTGACGGGTTGGAGTA 143373
|| | | | | |||| |||||| | |||||||||||||||||||| ||||| ||
Sbjct 522300 TTTA---AATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTT 522244
Query 143374 CGTGCACCAGCCATAATAGGAGTAGG 143399
| | | || | |||||| || || ||
Sbjct 522243 CTTACTCCTGACATAATCGGTGTGGG 522218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547492671677040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |