Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_014260.1 Length=172253 Score E Sequences producing significant alignments: (Bits) Value seq129631 150 2e-31 >seq129631 Length=630463 Score = 150 bits (166), Expect = 2e-31 Identities = 253/365 (69%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 144954 TTTTCATCAACGCCCTTGTTATTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAA 145013 ||||| |||| || | |||||||| | ||| | | |||||||| ||| | |||||| Sbjct 522579 TTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCAT 522520 Query 145014 ATAGGATAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACA 145073 || || ||| || |||| || || || || | | ||||||||| ||||| ||||| || Sbjct 522519 ATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACT 522460 Query 145074 GCAGTCTGGAAATGTTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCA 145133 || | ||||| ||||| | || |||||| |||||||| |||| || | | Sbjct 522459 GCGCTTTGGAAGTGTTTATAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTG 522400 Query 145134 ATACGAGAACCTTCAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAA 145193 ||| || ||| ||| ||||| |||| |||| || || || ||||| |||| |||| Sbjct 522399 ATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAA 522340 Query 145194 ATGTATTCAATTATCGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGC---T 145250 | |||| | || | ||| || |||||||| || | | | |||| | Sbjct 522339 ACATATTTTACAATTGCACTAGTTGTAGCATTAATAGAGTTTA---AATTATCTGCACAT 522283 Query 145251 TCAATAACCACACAAGAACTAAATTGGCGAGTCGGTGTACGCGCTCCAGCCATAATAGGG 145310 ||||| | |||||||||||||||||| ||||| ||||| | |||| | |||||| || Sbjct 522282 TCAATTAACACACAAGAACTAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGT 522223 Query 145311 GTAGG 145315 || || Sbjct 522222 GTGGG 522218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550054287458320