Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_014467.1
Length=176788
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 150 2e-31
>seq129631
Length=630463
Score = 150 bits (166), Expect = 2e-31
Identities = 302/448 (67%), Gaps = 0/448 (0%)
Strand=Plus/Plus
Query 41109 CTTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGT 41168
||| ||||| |||||||| | |||| | || |||| || || |||||| | || ||
Sbjct 522181 CTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGAGT 522240
Query 41169 GCGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGG 41228
| || || || ||||| || |||||| |||| |||| || ||| | |
Sbjct 522241 AAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTAAA 522300
Query 41229 TTCTCTGAACGCTGTTACGTCCGCGATCGTGAAATATATCTCTCAACGTGCGGGTATCGG 41288
||| | || ||| || || || || |||||| | |||||||| || || || ||
Sbjct 522301 CTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATAGG 522360
Query 41289 TGTCAACGCCGGACACATTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCA 41348
| ||||| || || ||||| ||| | || ||| | ||| |||||| | ||
Sbjct 522361 CATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTTCA 522420
Query 41349 TACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCTTGTTCCCAGGG 41408
||| || ||| || || | |||||| | || | || || ||||||||||| || ||
Sbjct 522421 TACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAAGG 522480
Query 41409 TGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAA 41468
||| ||| | || || || ||||| | | ||| || || |||||||| ||| |||||||
Sbjct 522481 TGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAAAA 522540
Query 41469 CCTGCTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCGTATTCGTCACCTGGACTA 41528
| | ||| | |||||||| | || |||||||||| | | ||||| || || ||
Sbjct 522541 TTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGATTA 522600
Query 41529 TGGCGTACAGCTTAACGATTTGATGTAT 41556
|| ||||| |||| | || ||||||
Sbjct 522601 TGCTGTACAAATTAATAAATTAATGTAT 522628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564539234550720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |