Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq129631 150 2e-31 >seq129631 Length=630463 Score = 150 bits (166), Expect = 2e-31 Identities = 302/448 (67%), Gaps = 0/448 (0%) Strand=Plus/Plus Query 41109 CTTCTATAACGCAATTTCGGATCGTAAACTGTCATTACCTACGCCTATTATGGCGGGTGT 41168 ||| ||||| |||||||| | |||| | || |||| || || |||||| | || || Sbjct 522181 CTTTTATAATGCAATTTCCACTTTTAAAATATCTCTACCCACACCGATTATGTCAGGAGT 522240 Query 41169 GCGTACTCCTACGCGTCAGTTCTCCAGTTGTGTTGTAATCGAATCTGGTGATTCTCTGGG 41228 | || || || ||||| || |||||| |||| |||| || ||| | | Sbjct 522241 AAGAACACCAACTCGTCAATTTAGTTCTTGTGTGTTAATTGAATGTGCAGATAATTTAAA 522300 Query 41229 TTCTCTGAACGCTGTTACGTCCGCGATCGTGAAATATATCTCTCAACGTGCGGGTATCGG 41288 ||| | || ||| || || || || |||||| | |||||||| || || || || Sbjct 522301 CTCTATTAATGCTACAACTAGTGCAATTGTAAAATATGTTTCTCAACGAGCAGGAATAGG 522360 Query 41289 TGTCAACGCCGGACACATTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCA 41348 | ||||| || || ||||| ||| | || ||| | ||| |||||| | || Sbjct 522361 CATTAACGCTGGTCAAATTCGAGCTTTAGGAAGTCCTATCAGAAATGGAGAAGCATTTCA 522420 Query 41349 TACAGGCGTTATCCCGTTCTGGAAACACATTCAGACGGCGGTTAAATCTTGTTCCCAGGG 41408 ||| || ||| || || | |||||| | || | || || ||||||||||| || || Sbjct 522421 TACCGGATGTATTCCTTTTTATAAACACTTCCAAAGCGCAGTAAAATCTTGTTCTCAAGG 522480 Query 41409 TGGCGTTCGTGGTGGTGCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAA 41468 ||| ||| | || || || ||||| | | ||| || || |||||||| ||| ||||||| Sbjct 522481 TGGAGTTAGAGGAGGGGCCGCAACTGTTTTTTACCCAATATGGCATCTAGAAATTGAAAA 522540 Query 41469 CCTGCTGGTTCTGAAAAATAACCGTGGCGTTGAAGAAAACCGTATTCGTCACCTGGACTA 41528 | | ||| | |||||||| | || |||||||||| | | ||||| || || || Sbjct 522541 TTTATTAGTTTTAAAAAATAATAGAGGAATTGAAGAAAATAGAGTACGTCATCTTGATTA 522600 Query 41529 TGGCGTACAGCTTAACGATTTGATGTAT 41556 || ||||| |||| | || |||||| Sbjct 522601 TGCTGTACAAATTAATAAATTAATGTAT 522628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564539234550720