Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq129631 118 1e-21 >seq129631 Length=630463 Score = 118 bits (130), Expect = 1e-21 Identities = 290/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 142931 TTATTCAGCTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 142990 ||||| | || ||| |||| || | ||| | | | |||||||||| || | || Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 142991 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 143050 || || | ||| | ||||||||||| ||| | |||||| || || ||| || |||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 143051 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 143110 || || || | | ||||||||| ||||| ||||| || || ||||||| ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 143111 AACGGAATAACACCAGTATGCTTAACTTCGCCCATACCGATTTTCGAACCTTCGGCACGA 143170 || |||||| || ||||| |||| || | | ||| ||| || ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 143171 ATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGATGATTGAATTA 143230 || ||| |||| || || || ||||| || | | | ||||| | |||| | || Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 143231 GCAGTCTTATTAATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAAC 143290 | || |||||| || || | || || ||| || | ||| || ||||| || Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259 Query 143291 TGTCTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCAACGAAACCTGTCGAGTG 143350 || | || |||||||| | || | ||| || || ||||| | || | | |||| Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTG 522199 Query 143351 GATACTGCATCATAAAAACG 143370 || | ||||| |||||| || Sbjct 522198 GAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544790518371600