Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_014595.1
Length=170605
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 118 1e-21
>seq129631
Length=630463
Score = 118 bits (130), Expect = 1e-21
Identities = 290/440 (66%), Gaps = 0/440 (0%)
Strand=Plus/Minus
Query 142931 TTATTCAGCTGGACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 142990
||||| | || ||| |||| || | ||| | | | |||||||||| || | ||
Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559
Query 142991 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCA 143050
|| || | ||| | ||||||||||| ||| | |||||| || || ||| || |||| ||
Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499
Query 143051 GCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCCGTTTGGAAATGTTTCCAG 143110
|| || || | | ||||||||| ||||| ||||| || || ||||||| ||||| |
Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439
Query 143111 AACGGAATAACACCAGTATGCTTAACTTCGCCCATACCGATTTTCGAACCTTCGGCACGA 143170
|| |||||| || ||||| |||| || | | ||| ||| || |||
Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379
Query 143171 ATCATGCCAACGTTGATACCGATACCTGCACGCTTACTGATATATTCGATGATTGAATTA 143230
|| ||| |||| || || || ||||| || | | | ||||| | |||| | ||
Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319
Query 143231 GCAGTCTTATTAATTGACTTCAGGGAGTCAGCCGCTTCGATAACCACGCAGGAACTGAAC 143290
| || |||||| || || | || || ||| || | ||| || ||||| ||
Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259
Query 143291 TGTCTGGTAGGTGTTCTGGCGCCGGCCATGATAGGCGTGGGCAACGAAACCTGTCGAGTG 143350
|| | || |||||||| | || | ||| || || ||||| | || | | ||||
Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTG 522199
Query 143351 GATACTGCATCATAAAAACG 143370
|| | ||||| |||||| ||
Sbjct 522198 GAAATTGCATTATAAAAGCG 522179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 544790518371600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |