Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_014661.1
Length=164093
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 132 5e-26
>seq129631
Length=630463
Score = 132 bits (146), Expect = 5e-26
Identities = 296/442 (67%), Gaps = 2/442 (0%)
Strand=Plus/Minus
Query 141449 TAACTCATTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTT 141508
||| | ||| ||||| | ||||||| | ||||| | | |||||||||| ||| |
Sbjct 522622 TAATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCT 522563
Query 141509 GTTGTTCTTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGT 141568
|| || || || || | || ||||| | ||| || ||||| || ||| | || | ||
Sbjct 522562 ATTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGT 522503
Query 141569 TGCCGAACCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTT 141628
||| | ||| | || |||||||||||||| | | || || | ||||| ||
Sbjct 522502 TGCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTT 522443
Query 141629 CCAGAAAGGTACTACG-CCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAG 141687
| ||||| | ||| || || || |||| || | || ||| ||
Sbjct 522442 ATAAAAAGGAA-TACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAG 522384
Query 141688 CTCGAATCATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAG 141747
||||||| || |||||||| || || |||||||| | ||||||||| || ||||| |
Sbjct 522383 CTCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTG 522324
Query 141748 CAGAGTTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAAC 141807
|| ||| | |||| || |||| | | || || ||||||| | ||||| ||||
Sbjct 522323 CACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAAC 522264
Query 141808 TGAATTGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTAC 141867
| |||||||||||||| || | || || | |||||| || || || | || ||||||
Sbjct 522263 TAAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAA 522204
Query 141868 GAGTTGAAACAGCTTCATAAAA 141889
||| |||| || | ||||||
Sbjct 522203 AAGTGGAAATTGCATTATAAAA 522182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 523990964795920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |