Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq129631 156 4e-33 >seq129631 Length=630463 Score = 156 bits (172), Expect = 4e-33 Identities = 301/444 (68%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 137901 TTGATTTGAACACCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 137960 || ||||| ||| ||||||| | ||||| | || ||||| || | ||| | || || Sbjct 522615 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 522556 Query 137961 TTAAGTACGAGGAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCG 138020 || | || | | || |||| ||| || ||||| ||||| || | | || || || Sbjct 522555 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 522496 Query 138021 CCACCACGGACTCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 138080 || || | ||||| ||||| |||||||| || ||||| |||||| |||||| | ||| Sbjct 522495 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAA 522436 Query 138081 GGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGA----ACCTTCT---GC 138133 |||||| ||| ||||| ||||||| |||| ||| || | || || Sbjct 522435 GGAATACATCCGGTATGAAATGCTTCTCC-------ATTTCTGATAGGACTTCCTAAAGC 522383 Query 138134 ACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA 138193 ||||| ||| ||||||||||| || || || |||| ||| | || | |||||||| Sbjct 522382 TCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGC 522323 Query 138194 TTCAGCTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACT 138253 || || ||||| || || | ||| || |||||| | || |||||||| Sbjct 522322 ACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACT 522263 Query 138254 GAATTGACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTTCTT 138313 ||||||||||| || || | | |||| ||| || || || || ||||| ||||| Sbjct 522262 AAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAA 522203 Query 138314 AGTTGACACAGCATCATAAAAACG 138337 ||| || | |||| |||||| || Sbjct 522202 AGTGGAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528612732920000