Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 156 4e-33
>seq129631
Length=630463
Score = 156 bits (172), Expect = 4e-33
Identities = 301/444 (68%), Gaps = 14/444 (3%)
Strand=Plus/Minus
Query 137901 TTGATTTGAACACCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTC 137960
|| ||||| ||| ||||||| | ||||| | || ||||| || | ||| | || ||
Sbjct 522615 TTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTT 522556
Query 137961 TTAAGTACGAGGAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCG 138020
|| | || | | || |||| ||| || ||||| ||||| || | | || || ||
Sbjct 522555 TTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCC 522496
Query 138021 CCACCACGGACTCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAA 138080
|| || | ||||| ||||| |||||||| || ||||| |||||| |||||| | |||
Sbjct 522495 CCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAAAAA 522436
Query 138081 GGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGA----ACCTTCT---GC 138133
|||||| ||| ||||| ||||||| |||| ||| || | || ||
Sbjct 522435 GGAATACATCCGGTATGAAATGCTTCTCC-------ATTTCTGATAGGACTTCCTAAAGC 522383
Query 138134 ACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA 138193
||||| ||| ||||||||||| || || || |||| ||| | || | ||||||||
Sbjct 522382 TCGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGC 522323
Query 138194 TTCAGCTGATTTGTTAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACT 138253
|| || ||||| || || | ||| || |||||| | || ||||||||
Sbjct 522322 ACTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACT 522263
Query 138254 GAATTGACGAGTAGGAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTTCTT 138313
||||||||||| || || | | |||| ||| || || || || ||||| |||||
Sbjct 522262 AAATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAA 522203
Query 138314 AGTTGACACAGCATCATAAAAACG 138337
||| || | |||| |||||| ||
Sbjct 522202 AGTGGAAATTGCATTATAAAAGCG 522179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 528612732920000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |