Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_014663.1
Length=169947
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 143 3e-29
>seq129631
Length=630463
Score = 143 bits (158), Expect = 3e-29
Identities = 516/795 (65%), Gaps = 24/795 (3%)
Strand=Plus/Minus
Query 147764 CATAGTCCATGTGACGGATACGGTTTTCTTCAATACCTTTGTTGTTCTTGAGAACCATCA 147823
|||| || | ||||| | | ||||||||||| ||| | || || || | ||| | |
Sbjct 522602 CATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTATTTTTTAAAACTAATA 522543
Query 147824 AGTTCTCACATTCAAGGTGCCAAATCGGCCAGTAGCAAGTTGCCGAACCTTTACGAATAC 147883
| || ||| ||| || ||||| || || | | |||||| | ||| | || |
Sbjct 522542 AATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCGGCCCCTCCTCTAACTC 522483
Query 147884 CACCCTGTGAACAAGAGTGTACAGCAGCATTTTTAAGT--TTCCAGAATGGTGTAACACC 147941
|||| || |||||||| | ||| || || ||| |||| || | || || || ||
Sbjct 522482 CACCTTGAGAACAAGATTTTACTGC-GC-TTTGGAAGTGTTTATAAAAAGGAATACATCC 522425
Query 147942 GGTGTGCTTAACTTCACCAGGACCAATCTTAGAACCTTCAGCTCGGATTGCTCCTCCACT 148001
||| || |||| ||| | || | ||| |||||| ||| || | |
Sbjct 522424 GGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGAATTTGACCAGCGTT 522365
Query 148002 GATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTGATGTGGTTTCAGTAAT 148061
||||| || |||||||||| ||| |||||||||||||| || || || || ||||
Sbjct 522364 AATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTAGTTGTAGCATTAAT 522305
Query 148062 TGATTCTAAATCGTCGCCAGTTTCAATCAATACACACGAACTGAATTGACGTGTTGGAGT 148121
|| | ||||| || || |||||| || ||||| ||||| |||||||| ||||| ||
Sbjct 522304 AGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAATTGACGAGTTGGTGT 522245
Query 148122 CCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAATTGCGATGCAGCATCATA 148181
| || |||| | ||| || || || | | ||||| || || |||| |||
Sbjct 522244 TCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTGGAAATTGCATTATA 522185
Query 148182 AAAATCTTTGATGTATTGCAAACGTTTTGCTGGGTTTTCGT-TTTGG--TGTAAGCACAT 148238
||| | || || | || ||| | | ||||||| ||| | ||||||
Sbjct 522184 AAAGCGCTGAATATAATTCATACGAATATTT---TTTTCGTATTTAGAAAATAAGCATGC 522128
Query 148239 ACCAATGAGCATGTACAAGAACTGCGGAGTTTCAAAAATTTCACCAGATGAGCGATCTTT 148298
| || | || || || || || | | ||||| | ||||| |||| |||| ||
Sbjct 522127 AGATATTAAAATATATAAAAATTGTGCACTTTCATATATTTCTCCAGTAACACGATTTTG 522068
Query 148299 TACAAGATACTTATCTTTCATTTGCATTGTAC--CGGCATAGGTGAAATTGAAGTCGCGA 148356
|| | |||||| ||| | ||| || ||| | ||||| | ||||| | ||| ||
Sbjct 522067 TAATAAATACTTTCCTTCTAATTG--TTTTACTGCTGCATAAGAAAAATTCATGTCACGC 522010
Query 148357 TCATGATCAATCATTGCATTCAATGCATCAAATTCTTCACGAGTATAACGTT-CAATAAT 148415
|||||| || | || ||||| | | || |||||| | || |||| || ||||||
Sbjct 522009 CAATGATCGATAAATGAATTCATTTCTACATATTCTTTAAAAGAATAATTTTGTAATAAT 521950
Query 148416 TTCTGGGTCATAGATTCCTACAT----CAGTTTTTGCGACGACATGATCATACAAATGAG 148471
|| | |||||| |||||| || || ||||| ||||||| ||||| | ||
Sbjct 521949 TT-TTCGTCATATTTTCCTAAATTGACCATTTTTT----TTACATGATGATACAGAATAG 521895
Query 148472 GTGGATCGAATTGCCCATAGACTTCTTTGCGAAGACCGAATTGTGCAAGATTAGATGCAA 148531
|||| || ||||| || || ||| ||| | |||| || ||||| | | ||| |
Sbjct 521894 GTGGTTCAAATTGACCGTAAGCTTTTTTCCTAAGATGAAAAATAGCAAGTCTTGCTGCCA 521835
Query 148532 CGTATTGATAATCAG 148546
|||||||||||||
Sbjct 521834 TATATTGATAATCAG 521820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 542688843578480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |