Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq129631 122 9e-23 >seq129631 Length=630463 Score = 122 bits (134), Expect = 9e-23 Identities = 291/440 (66%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 141354 TTATTCAACTGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 141413 ||||| | || ||| |||| || | ||| | | | |||||||||| || | || Sbjct 522618 TTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTATTA 522559 Query 141414 TTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 141473 || || | ||| | ||||||||||| ||| | |||||||| || ||| || |||| || Sbjct 522558 TTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTTGCG 522499 Query 141474 GCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 141533 || || || | | ||||||||| ||||| ||||| || || ||||||| ||||| | Sbjct 522498 GCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTATAA 522439 Query 141534 AACGGAATAACACCAGTATGCTTGACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 141593 || |||||| || ||||| |||| || | | ||| ||| ||| ||| Sbjct 522438 AAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCTCGA 522379 Query 141594 ATCATGCCAACGTTGATACCGATACCCGCCCGCTTACTGATATATTCGATGATTGAATTG 141653 || ||| |||| || || || || || || | | | ||||| | |||| | | Sbjct 522378 ATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCACTA 522319 Query 141654 GCGGTCTTATTGATTGACTTCAGGGAGTCAGCAGCTTCGATAACCACACAGGAACTGAAC 141713 | || ||| || || || | || ||| ||| || | |||||| ||||| || Sbjct 522318 GTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTAAAT 522259 Query 141714 TGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCTGTCTTGTG 141773 || || || |||||||| | || | ||| || |||||||| | || | | ||| Sbjct 522258 TGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAAGTG 522199 Query 141774 GATACTGCATCATAAAAACG 141793 || | ||||| |||||| || Sbjct 522198 GAAATTGCATTATAAAAGCG 522179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540574392646800