Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01]
149,134 sequences; 10,494,855,601 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq129631 127 3e-24
>seq129631
Length=630463
Score = 127 bits (140), Expect = 3e-24
Identities = 409/630 (65%), Gaps = 10/630 (2%)
Strand=Plus/Minus
Query 33121 AACTTGTTAATATGTACTGTATAATCAATATTACGAATACGGGTTTCTTCAGTACCTTTA 33180
|| || ||||| ||||| | |||||||| || ||| | | |||||||| | ||| ||
Sbjct 522621 AATTTATTAATTTGTACAGCATAATCAAGATGACGTACTCTATTTTCTTCAATTCCTCTA 522562
Query 33181 TTATTTTTCAATACCAGAAGCTTTTCAACTTCCAAATGCCACATAGGATAGTTAATATTA 33240
|||||||| || || | | ||||||| ||| | |||||| || || || || | |
Sbjct 522561 TTATTTTTTAAAACTAATAAATTTTCAATTTCTAGATGCCATATTGGGTAAAAAACAGTT 522502
Query 33241 CCACTACCNNNNNGAACACCACCTTGGCTACAGCTCTTAACACCGGTAGTAAAATGTTTC 33300
| || ||| |||||||| ||| || || || | || |||||
Sbjct 522501 GCGGCCCCTCCTCTAACTCCACCTTGAGAACAAGATTTTACTGCGCTTTGGAAGTGTTTA 522442
Query 33301 CAGAATGGAATGACCCCAGTGTGGGAAACTTCCCCCGAGCGGATACGAGATCCTTCAGCA 33360
| || ||||| || || || | |||| || | |||| || |||| |||
Sbjct 522441 TAAAAAGGAATACATCCGGTATGAAATGCTTCTCCATTTCTGATAGGACTTCCTAAAGCT 522382
Query 33361 CGAATAGCACCACCATTAATACCAATACCGGCACGGCGGGAAATATATTTCATTATCGCT 33420
||||| |||| | ||||| || || || || || | |||| |||||| | || ||
Sbjct 522381 CGAATTTGACCAGCGTTAATGCCTATTCCTGCTCGTTGAGAAACATATTTTACAATTGCA 522322
Query 33421 TTTGATGTTTCTCCGATAGATTCAAGAGAGTCACCGGATTCAATTTTAACGCATGAGCTA 33480
| | ||| | ||||| | | | || | |||||||| || || || |||
Sbjct 522321 CTAGTTGTAGCATTAATAGAGTTTAAATTATCTGCACATTCAATTAACACACAAGAACTA 522262
Query 33481 AATTGACGAGTTGGAGTTCTTACACCAGAAAGAATTGGTGTCGGTAGAGAAATTTCAAAA 33540
|||||||||||||| |||||||| || || | ||| ||||| |||||||| |||| ||||
Sbjct 522261 AATTGACGAGTTGGTGTTCTTACTCCTGACATAATCGGTGTGGGTAGAGATATTTTAAAA 522202
Query 33541 TTACTAGCGGCATTATAAAAATCGAT-AACATATTCCAAACGTTTGGAAACGTCTTCTTC 33599
| | ||||||| |||| || | || ||| | || ||| | | | ||| |
Sbjct 522201 GTGGAAATTGCATTAT-AAAAGCGCTGAATATAATTCATACGAAT---ATTTTTTTCGTA 522146
Query 33600 TTGATGAAGACA--CAT--AGCTTGTAACATATATGCAAACTGTGGAGTTTCATAAATTG 33655
|| | ||| | | ||| || | ||| |||||| ||| |||| | ||||||| |||
Sbjct 522145 TTTA-GAAAATAAGCATGCAGATATTAAAATATATAAAAATTGTGCACTTTCATATATTT 522087
Query 33656 TACCGTTAGAACGGTCTTTTACAAGATATTTTTCTTTATACTGCATAGCACCAGCATAAG 33715
|| || ||| | || || | ||| ||| ||| | || | | | |||||||
Sbjct 522086 CTCCAGTAACACGATTTTGTAATAAATACTTTCCTTCTAATTGTTTTACTGCTGCATAAG 522027
Query 33716 TGAAATTCATATCTCGGGTGTGATCGATAA 33745
|||||||| || || ||||||||||
Sbjct 522026 AAAAATTCATGTCACGCCAATGATCGATAA 521997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751201812946960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |