Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Triticum_20dicoccoides_20[genbank_20GCA_5F002162155.1_202017-06-01] 149,134 sequences; 10,494,855,601 total letters Query= NC_016158.1 Length=49576 Score E Sequences producing significant alignments: (Bits) Value seq146710 87.8 6e-13 >seq146710 Length=16940 Score = 87.8 bits (96), Expect = 6e-13 Identities = 86/110 (78%), Gaps = 6/110 (5%) Strand=Plus/Minus Query 44408 TCGAAGGTTCGAATCCTTCCTGTCCCGCCAATTC---TGCATCTGTCGTAGTTTGGGAAT 44464 ||||||||||||||||||| |||| |||| ||| ||||| ||| || Sbjct 3707 TCGAAGGTTCGAATCCTTC---TCCCACCAAAAAAAATGCGGACATCGTATAATGGCTAT 3651 Query 44465 TACGTCTGGCTTCCAAGCTGATGATGCGGGTTCGATTCCCGCTGCCCGCT 44514 ||| || | |||||||||||||||||||||||| |||||||||||||||| Sbjct 3650 TACCTCAGCCTTCCAAGCTGATGATGCGGGTTCAATTCCCGCTGCCCGCT 3601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158240863596504